RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 VASH2Q86V25 355 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 OR1L8Q8NGR8 309 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 AMELYQ99218 206 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 GPR35Q9HC97 309 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 TRBV24-1A0A075B6N3 115 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 LIFP15018 202 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 CA7P43166 264 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 ZNF646O15015 1829 aaPredicted RBP15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 ARID1AO14497 2285 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 OR8A1Q8NGG7 326 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 DNASE2BQ8WZ79 361 aa15.1■□□□□ 0.01
PCDHA13-201ENST00000289272 MSGN1A6NI15 193 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 CD3EP07766 207 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 RPS20P60866 119 aaKnown RBP15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 OR4X1Q8NH49 305 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 RND1Q92730 232 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 ALKBH7Q9BT30 221 aaPredicted RBP15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 PRRX1P54821 245 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 NUTF2P61970 127 aaKnown RBP15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 LRRC75BQ2VPJ9 315 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 OR10AG1Q8NH19 301 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 SRIP30626 198 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 SPINK14Q6IE38 97 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 KCNS1Q96KK3 526 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 OR4A8P0C604 315 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 TNFAIP6P98066 277 aaPredicted RBP15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 OR1B1Q8NGR6 318 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 NEUROG3Q9Y4Z2 214 aa15.09■□□□□ 0.01
PCDHA13-201ENST00000289272 SRSF9Q13242 221 aaKnown RBP eCLIP15.08■□□□□ 0.01
PCDHA13-201ENST00000289272 TMEM30BQ3MIR4 351 aa15.08■□□□□ 0.01
PCDHA13-201ENST00000289272 RNF126Q9BV68 326 aa15.08■□□□□ 0.01
PCDHA13-201ENST00000289272 SPINK9Q5DT21 86 aa15.08■□□□□ 0.01
PCDHA13-201ENST00000289272 RAB1CQ92928 201 aa15.08■□□□□ 0.01
PCDHA13-201ENST00000289272 MYOFQ9NZM1 2061 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 K7ESF4 209 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 M0QZ24 198 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST1H2BKO60814 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST1H2BJP06899 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST1H2BOP23527 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST1H2BBP33778 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST1H2BDP58876 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST1H2BCP62807 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST2H2BEQ16778 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST1H2BHQ93079 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST1H2BNQ99877 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST1H2BMQ99879 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 OTOFQ9HC10 1997 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 SIP14410 1827 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 IGFBP3P17936 291 aaPredicted RBP15.08■□□□□ 0
PCDHA13-201ENST00000289272 HIST3H2BBQ8N257 126 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 UBALD1Q8TB05 177 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 CCL3P10147 92 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 GNG10P50151 68 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 RCC1LQ96I51 464 aaKnown RBP15.08■□□□□ 0
PCDHA13-201ENST00000289272 FSCN3Q9NQT6 498 aa15.08■□□□□ 0
PCDHA13-201ENST00000289272 ORM2P19652 201 aa15.07■□□□□ 0
PCDHA13-201ENST00000289272 CEBPDP49716 269 aaPredicted RBP15.07■□□□□ 0
PCDHA13-201ENST00000289272 INO80CQ6PI98 192 aaPredicted RBP15.07■□□□□ 0
PCDHA13-201ENST00000289272 OR8B3Q8NGG8 313 aa15.07■□□□□ 0
PCDHA13-201ENST00000289272 ANK1P16157 1881 aa15.07■□□□□ 0
PCDHA13-201ENST00000289272 DEFB108AA8MXU0 73 aa15.07■□□□□ 0
PCDHA13-201ENST00000289272 STPG1Q5TH74 334 aa15.07■□□□□ 0
PCDHA13-201ENST00000289272 GRAMD2BQ96HH9 432 aa15.07■□□□□ 0
PCDHA13-201ENST00000289272 RTBDNQ9BSG5 229 aaPredicted RBP15.07■□□□□ 0
PCDHA13-201ENST00000289272 LAMTOR2Q9Y2Q5 125 aa15.07■□□□□ 0
PCDHA13-201ENST00000289272 MAS1LP35410 378 aa15.07■□□□□ 0
PCDHA13-201ENST00000289272 CEACAM3P40198 252 aa15.07■□□□□ 0
PCDHA13-201ENST00000289272 IGLV3-21P80748 117 aaPredicted RBP15.07■□□□□ 0
PCDHA13-201ENST00000289272 SNRNP40Q96DI7 357 aaKnown RBP15.07■□□□□ 0
PCDHA13-201ENST00000289272 RPL30P62888 115 aaKnown RBP15.06■□□□□ 0
PCDHA13-201ENST00000289272 OR1K1Q8NGR3 316 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 GUCD1Q96NT3 240 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 RFESDQ8TAC1 157 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 NYNRINQ9P2P1 1898 aaKnown RBP15.06■□□□□ 0
PCDHA13-201ENST00000289272 IGKV1D-42A0A075B6H8 117 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 ZDHHC16Q969W1 377 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 PILRBQ9UKJ0 227 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 SPAG17Q6Q759 2223 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 SMIM13P0DJ93 91 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 PRSS12P56730 875 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 UCN2Q96RP3 112 aa15.06■□□□□ 0
PCDHA13-201ENST00000289272 TRAV38-1A0A0B4J264 116 aa15.05■□□□□ 0
PCDHA13-201ENST00000289272 PATE3B3GLJ2 98 aa15.05■□□□□ 0
PCDHA13-201ENST00000289272 COX5BP10606 129 aa15.05■□□□□ 0
PCDHA13-201ENST00000289272 FHITP49789 147 aa15.05■□□□□ 0
PCDHA13-201ENST00000289272 LYZP61626 148 aa15.05■□□□□ 0
PCDHA13-201ENST00000289272 NR2C2APQ86WQ0 139 aa15.05■□□□□ 0
PCDHA13-201ENST00000289272 CHRNA10Q9GZZ6 450 aa15.05■□□□□ 0
PCDHA13-201ENST00000289272 OR51B2Q9Y5P1 312 aa15.05■□□□□ 0
PCDHA13-201ENST00000289272 FAM90A27PA6NNH2 459 aa15.05■□□□□ -0
PCDHA13-201ENST00000289272 TMEM229AB2RXF0 380 aa15.05■□□□□ -0
PCDHA13-201ENST00000289272 LYZL6O75951 148 aa15.05■□□□□ -0
PCDHA13-201ENST00000289272 CCL2P13500 99 aa15.05■□□□□ -0
PCDHA13-201ENST00000289272 UCP1P25874 307 aa15.05■□□□□ -0
PCDHA13-201ENST00000289272 MAGEA5P43359 124 aa15.05■□□□□ -0
PCDHA13-201ENST00000289272 TET1Q8NFU7 2136 aa15.05■□□□□ -0
PCDHA13-201ENST00000289272 LOC102724200A0A096LPH7 203 aaPredicted RBP15.05■□□□□ -0
PCDHA13-201ENST00000289272 A0A1B0GW15 77 aa15.05■□□□□ -0
PCDHA13-201ENST00000289272 MS4A18H0YCH9 400 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms