RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 NDUFAF3Q9BU61 184 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 LRRK1Q38SD2 2015 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 IGLV3-19P01714 112 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 COL8A1P27658 744 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 TNFSF10P50591 281 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 WNT10AQ9GZT5 417 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 WDR54Q9H977 334 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 IGKV1D-8A0A087WSZ0 117 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 COX6A1P12074 109 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 ERVFRD-1P60508 538 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 SRSF9Q13242 221 aaKnown RBP eCLIP10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 RTBDNQ9BSG5 229 aaPredicted RBP10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 MRPL13Q9BYD1 178 aaKnown RBP10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 ZNF391Q9UJN7 358 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 PSG2P11465 335 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 BIVMQ86UB2 503 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 Q96M66 194 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 CLN8Q9UBY8 286 aa10.79□□□□□ -0.68
SLC6A1-201ENST00000287766 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 SERF2P84101 59 aa10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 MRPL18Q9H0U6 180 aaKnown RBP10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 MYO7BQ6PIF6 2116 aa10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 PITX3O75364 302 aa10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 TFPI2P48307 235 aa10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 AGFG2O95081 481 aa10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 IL3RAP26951 378 aa10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 EIF3IQ13347 325 aaKnown RBP10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 TMEM116Q8NCL8 245 aa10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 FLYWCH2Q96CP2 140 aaKnown RBP10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 RNF126Q9BV68 326 aa10.78□□□□□ -0.68
SLC6A1-201ENST00000287766 SMPD2O60906 423 aa10.77□□□□□ -0.68
SLC6A1-201ENST00000287766 MT-CO3P00414 261 aa10.77□□□□□ -0.68
SLC6A1-201ENST00000287766 RPS23P62266 143 aaKnown RBP10.77□□□□□ -0.68
SLC6A1-201ENST00000287766 DEFB109BQ30KR1 87 aa10.77□□□□□ -0.68
SLC6A1-201ENST00000287766 POC1AQ8NBT0 407 aa10.77□□□□□ -0.68
SLC6A1-201ENST00000287766 RBKSQ9H477 322 aa10.77□□□□□ -0.68
SLC6A1-201ENST00000287766 TMEM167BQ9NRX6 74 aa10.77□□□□□ -0.68
SLC6A1-201ENST00000287766 TANC1Q9C0D5 1861 aa10.77□□□□□ -0.68
SLC6A1-201ENST00000287766 CELA3AP09093 270 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 FABP2P12104 132 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 RELBQ01201 579 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 ZNF766Q5HY98 468 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 ASPHD2Q6ICH7 369 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 OR2Z1Q8NG97 314 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 OR8B3Q8NGG8 313 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 C5orf42Q9H799 3197 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 RBP4P02753 201 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 SLC25A34Q6PIV7 304 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 CALHM1Q8IU99 346 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 LRRC3CA6NJW4 275 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 M0R1B8 84 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 ZIC3O60481 467 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 IL2RAP01589 272 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 P01737 135 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 GCSHP23434 173 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 CBLN1P23435 193 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 SRIP30626 198 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 TMEM211Q6ICI0 200 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 C5orf17Q8NAS9 161 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 WNT5BQ9H1J7 359 aa10.77□□□□□ -0.69
SLC6A1-201ENST00000287766 OR4C46A6NHA9 309 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 NKX6-3A6NJ46 265 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 SPRY3O43610 288 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 LGALS4P56470 323 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 ZNF441Q8N8Z8 693 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 C10orf35Q96D05 121 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 MISP3Q96FF7 219 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 LYZL4Q96KX0 146 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 OR2J1Q9GZK6 312 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 TMSB15BA0A087X1C1 80 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 SMIM21Q3B7S5 101 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 Q8WTZ3 238 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 CHRNA10Q9GZZ6 450 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 IL36GQ9NZH8 169 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 IL36RNQ9UBH0 155 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 LOC107984156A0A0G2JMH3 177 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 B4E171 279 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 C3orf80F5H4A9 247 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 RPL36A-HNRNPH2H7BZ11 118 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 FGF5P12034 268 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 COL10A1Q03692 680 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 C5orf24Q7Z6I8 188 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 ARL17AQ8IVW1 177 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 FAM131CQ96AQ9 280 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 DECR2Q9NUI1 292 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 LOC389332A0A1B0GUA5 103 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 FXYD3Q14802 87 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 RTP5Q14D33 572 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 ATP1A1-AS1Q5TC04 95 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 ARL6IP6Q8N6S5 226 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 MOB3AQ96BX8 217 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 RPRMQ9NS64 109 aa10.76□□□□□ -0.69
SLC6A1-201ENST00000287766 KIAA1671Q9BY89 1806 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 THADAQ6YHU6 1953 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 A0A1B0GU03 582 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 LEPROTL1O95214 131 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 CEBPDP49716 269 aaPredicted RBP10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 STARD6P59095 220 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 MDP1Q86V88 176 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms