RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 H1FXQ92522 213 aaKnown RBP14.86□□□□□ -0.03
CAPN1-201ENST00000279247 C14orf79Q96F83 325 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 GINS3Q9BRX5 216 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 ZNF665Q9H7R5 613 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 TANC2Q9HCD6 1990 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 TRGV10A0A0A0MS01 117 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 E7EQL1 145 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 LYNX1G3V0Z9 82 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 LYNX1P0DP58 116 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 ARL16Q0P5N6 197 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 PRAMEF5Q5TYX0 476 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 LYG1Q8N1E2 194 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 EDARADDQ8WWZ3 215 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 LOXL3P58215 753 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 C1orf229Q6ZS94 237 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-201ENST00000279247 THNSL2Q86YJ6 484 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 ZNF561Q8N587 486 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 SAT2Q96F10 170 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-201ENST00000279247 OR6C3Q9NZP0 311 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 MMP24Q9Y5R2 645 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 MALRD1Q5VYJ5 2156 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 UBE2KP61086 200 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 KLRB1Q12918 225 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 LILRB2Q8N423 598 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 RSG1Q9BU20 258 aa14.85□□□□□ -0.03
CAPN1-201ENST00000279247 RAB19A4D1S5 217 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 SEC11BP0C7V7 166 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 PLA2G5P39877 138 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 HTD2P86397 168 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 RAB40CQ96S21 281 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 EIF5A2Q9GZV4 153 aaKnown RBP14.84□□□□□ -0.03
CAPN1-201ENST00000279247 RBKSQ9H477 322 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 CACFD1Q9UGQ2 172 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 LRRC30A6NM36 301 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 MARCH11A6NNE9 402 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 C9JQL5 133 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 PPT1P50897 306 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 F2RL1P55085 397 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 C17orf58Q2M2W7 97 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 NGBQ9NPG2 151 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 C19orf12Q9NSK7 152 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 SHISA9B4DS77 424 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 ZG16O60844 167 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 CD55P08174 381 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 DANCRP0C864 163 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 CCL3L1P16619 93 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 TRAT1Q6PIZ9 186 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 ZBTB34Q8NCN2 500 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 UQCC1Q9NVA1 299 aa14.84□□□□□ -0.03
CAPN1-201ENST00000279247 DUTP33316 252 aaKnown RBP14.83□□□□□ -0.04
CAPN1-201ENST00000279247 SULT1A1P50225 295 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 PRB3Q04118 309 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-201ENST00000279247 TMEM88Q6PEY1 159 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 BTNL8Q6UX41 500 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 RNASE6Q93091 150 aaKnown RBP14.83□□□□□ -0.04
CAPN1-201ENST00000279247 JPT1Q9UK76 154 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 ASH1LQ9NR48 2969 aaKnown RBP14.83□□□□□ -0.04
CAPN1-201ENST00000279247 CEBPZOSA8MTT3 80 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 TNFRSF9Q07011 255 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 CT45A1Q5HYN5 189 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 LYPD2Q6UXB3 125 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 ZNF788Q6ZQV5 615 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 TCF23Q7RTU1 214 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 CT45A3Q8NHU0 189 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 R3HDM4Q96D70 268 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 EGLN1Q9GZT9 426 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 ARV1Q9H2C2 271 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 PARP11Q9NR21 331 aa14.83□□□□□ -0.04
CAPN1-201ENST00000279247 SLC25A10Q9UBX3 287 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-201ENST00000279247 TOR1AO14656 332 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 EIF4EBP1Q13541 118 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-201ENST00000279247 MSMO1Q15800 293 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 DMRTC2Q8IXT2 367 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-201ENST00000279247 HSD17B10Q99714 261 aaKnown RBP14.82□□□□□ -0.04
CAPN1-201ENST00000279247 IFI27L2Q9H2X8 130 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 KBTBD11-OT1A0A1B0GTJ5 212 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 VSTM5A8MXK1 200 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 RNASEK-C17orf49H0YIS7 233 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 IFNA17P01571 189 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 CD3EP07766 207 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 CA7P43166 264 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 CEBPGP53567 150 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 ZNF273Q14593 569 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 SDSLQ96GA7 329 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 ATP5SQ99766 215 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 PRORYQ9H606 182 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 CISD1Q9NZ45 108 aaKnown RBP14.82□□□□□ -0.04
CAPN1-201ENST00000279247 FLNCQ14315 2725 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 HAPLN4Q86UW8 402 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 CA5BP1Q8WTZ4 195 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 FAM222BQ8WU58 562 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 WSB1Q9Y6I7 421 aa14.82□□□□□ -0.04
CAPN1-201ENST00000279247 SAA2-SAA4A0A096LPE2 208 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 IFNA5P01569 189 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 SAA2P0DJI9 122 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-201ENST00000279247 IL34Q6ZMJ4 242 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-201ENST00000279247 WNK2Q9Y3S1 2297 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 PPIAL4EA0A075B759 164 aa14.81□□□□□ -0.04
CAPN1-201ENST00000279247 UBE2L5PA0A1B0GUS4 154 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms