RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 RALYQ9UKM9 306 aaKnown RBP18.12■□□□□ 0.49
CCDC7-201ENST00000277657 G6PCP35575 357 aa18.11■□□□□ 0.49
CCDC7-201ENST00000277657 GNG10P50151 68 aa18.11■□□□□ 0.49
CCDC7-201ENST00000277657 AVPI1Q5T686 147 aa18.11■□□□□ 0.49
CCDC7-201ENST00000277657 OR2C3Q8N628 320 aa18.11■□□□□ 0.49
CCDC7-201ENST00000277657 UBTD1Q9HAC8 227 aa18.11■□□□□ 0.49
CCDC7-201ENST00000277657 FBXL17Q9UF56 701 aa18.11■□□□□ 0.49
CCDC7-201ENST00000277657 GPR37O15354 613 aa18.1■□□□□ 0.49
CCDC7-201ENST00000277657 TMEM50AO95807 157 aa18.1■□□□□ 0.49
CCDC7-201ENST00000277657 BAP18Q8IXM2 172 aa18.1■□□□□ 0.49
CCDC7-201ENST00000277657 LYG1Q8N1E2 194 aa18.1■□□□□ 0.49
CCDC7-201ENST00000277657 PCNPQ8WW12 178 aaKnown RBP18.1■□□□□ 0.49
CCDC7-201ENST00000277657 LYRM2Q9NU23 88 aaPredicted RBP18.1■□□□□ 0.49
CCDC7-201ENST00000277657 FLNCQ14315 2725 aa18.1■□□□□ 0.49
CCDC7-201ENST00000277657 CHST1O43916 411 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 RAB1CQ92928 201 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 TIMD4Q96H15 378 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 PRELID3BQ9Y3B1 194 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 DOPEY1Q5JWR5 2465 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 WRBO00258 174 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 FCGR3BO75015 233 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 NXPH3O95157 252 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 HPRT1P00492 218 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 GAPDHP04406 335 aaKnown RBP18.09■□□□□ 0.49
CCDC7-201ENST00000277657 NMBP08949 121 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 KIR2DS2P43631 304 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 PAX9P55771 341 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 MIDNQ504T8 468 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 ZNF843Q8N446 348 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 C8orf31Q8N9H6 132 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 RAB39BQ96DA2 213 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 BSCL2Q96G97 398 aaPredicted RBP18.09■□□□□ 0.49
CCDC7-201ENST00000277657 CHODLQ9H9P2 273 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 MIOXQ9UGB7 285 aa18.09■□□□□ 0.49
CCDC7-201ENST00000277657 FAM90A26D6RGX4 464 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 TOR1AO14656 332 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 GOSR1O95249 250 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 VAMP2P63027 116 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 ZNF295-AS1Q8N0V1 137 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 ZNF596Q8TC21 504 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 ADTRPQ96IZ2 230 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 RAB40CQ96S21 281 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 S1PR3Q99500 378 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 AUP1Q9Y679 476 aa18.08■□□□□ 0.49
CCDC7-201ENST00000277657 DOCK11Q5JSL3 2073 aa18.08■□□□□ 0.48
CCDC7-201ENST00000277657 A0A087X0M5 115 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 A0A1B0GX30 115 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 FAM24AA6NFZ4 105 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 MARCH11A6NNE9 402 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 PPIHO43447 177 aaKnown RBP18.07■□□□□ 0.48
CCDC7-201ENST00000277657 THBS3P49746 956 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 EWSR1Q01844 656 aaKnown RBP eCLIP18.07■□□□□ 0.48
CCDC7-201ENST00000277657 RPL7L1Q6DKI1 246 aaKnown RBP18.07■□□□□ 0.48
CCDC7-201ENST00000277657 C11orf42Q8N5U0 333 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 SLC25A32Q9H2D1 315 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 IGSF23A1L1A6 192 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 NHLH2Q02577 135 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 CLEC9AQ6UXN8 241 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 TMEM252Q8N6L7 170 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 OR8B3Q8NGG8 313 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 R3HDM4Q96D70 268 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 NEIL1Q96FI4 390 aaPredicted RBP18.07■□□□□ 0.48
CCDC7-201ENST00000277657 OR8B2Q96RD0 313 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 EPG5Q9HCE0 2579 aa18.07■□□□□ 0.48
CCDC7-201ENST00000277657 SYNGR2O43760 224 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 JTBO76095 146 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 S100A1P23297 94 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 CDKN1AP38936 164 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 CAV2P51636 162 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 EIF5AP63241 154 aaKnown RBP18.06■□□□□ 0.48
CCDC7-201ENST00000277657 H2BFWTQ7Z2G1 175 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 LINC00311Q8N616 119 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 C8orf46Q8TAG6 207 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 SLC25A31Q9H0C2 315 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 ZNRD1Q9P1U0 126 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 MALRD1Q5VYJ5 2156 aa18.06■□□□□ 0.48
CCDC7-201ENST00000277657 F12P00748 615 aaPredicted RBP18.05■□□□□ 0.48
CCDC7-201ENST00000277657 WDR25Q64LD2 544 aaPredicted RBP18.05■□□□□ 0.48
CCDC7-201ENST00000277657 ZNF833PQ6ZTB9 187 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 ZNF383Q8NA42 475 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 SMIM3Q9BZL3 60 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.05■□□□□ 0.48
CCDC7-201ENST00000277657 HSPB7Q9UBY9 170 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 WSB1Q9Y6I7 421 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 USP9XQ93008 2570 aaPredicted RBP18.05■□□□□ 0.48
CCDC7-201ENST00000277657 C1QL1O75973 258 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 RNF224P0DH78 156 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 IGHV1-8P0DP01 117 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 FAM74A1Q5RGS3 127 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 UBAC2Q8NBM4 344 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 OR4S2Q8NH73 311 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 WFDC1Q9HC57 220 aa18.05■□□□□ 0.48
CCDC7-201ENST00000277657 FAM90A9PA6NNJ1 464 aa18.04■□□□□ 0.48
CCDC7-201ENST00000277657 TNFRSF9Q07011 255 aa18.04■□□□□ 0.48
CCDC7-201ENST00000277657 J3QR06 171 aa18.03■□□□□ 0.48
CCDC7-201ENST00000277657 CT45A6P0DMU7 189 aa18.03■□□□□ 0.48
CCDC7-201ENST00000277657 CT45A5P0DMU8 189 aa18.03■□□□□ 0.48
CCDC7-201ENST00000277657 CT45A7P0DMV0 189 aa18.03■□□□□ 0.48
CCDC7-201ENST00000277657 RPL23AP62750 156 aaKnown RBP18.03■□□□□ 0.48
CCDC7-201ENST00000277657 BAXQ07812 192 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms