RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 C17orf51A8MQB3 221 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF250P15622 560 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 LILRA6Q6PI73 481 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 DMRT1Q9Y5R6 373 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 FAM157AC9JC47 383 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 RCC1P18754 421 aaPredicted RBP6.93□□□□□ -1.3
LIMD1-201ENST00000273317 TSPAN7P41732 249 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 BHLHA9Q7RTU4 235 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF441Q8N8Z8 693 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 WFIKKN1Q96NZ8 548 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 IGHV1OR15-9A0A0B4J2B8 117 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 HLA-DRB1P01911 266 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 REC114Q7Z4M0 266 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 BEX4Q9NWD9 120 aaPredicted RBP6.93□□□□□ -1.3
LIMD1-201ENST00000273317 LINC01565O15544 149 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 PTP4A3O75365 173 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 RBKSQ9H477 322 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 APOBEC4Q8WW27 367 aaKnown RBP6.93□□□□□ -1.3
LIMD1-201ENST00000273317 OR5AC2Q9NZP5 309 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 RABAC1Q9UI14 185 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 TGFAP01135 160 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 CKS2P33552 79 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 COL10A1Q03692 680 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 RELQ04864 619 aaPredicted RBP6.93□□□□□ -1.3
LIMD1-201ENST00000273317 MMDQ15546 238 aa6.93□□□□□ -1.3
LIMD1-201ENST00000273317 RBFOX2O43251 390 aaKnown RBP eCLIP6.92□□□□□ -1.38e-7■■□□□ 13.4
LIMD1-201ENST00000273317 RPL31P62899 125 aaKnown RBP6.92□□□□□ -1.3
LIMD1-201ENST00000273317 HERPUD1Q15011 391 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 TRIP6Q15654 476 aaKnown RBP6.92□□□□□ -1.3
LIMD1-201ENST00000273317 SPINK14Q6IE38 97 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 TCF24Q7RTU0 167 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 PTPMT1Q8WUK0 201 aaPredicted RBP6.92□□□□□ -1.3
LIMD1-201ENST00000273317 PARD6GQ9BYG4 376 aaPredicted RBP6.92□□□□□ -1.3
LIMD1-201ENST00000273317 MS4A5Q9H3V2 200 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 A0A1W2PPC1 479 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 FAM106CPP0CH98 169 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 SFTPCP11686 197 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF137PP52743 207 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 A0A1B0GW15 77 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 MGST3O14880 152 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 RPL8P62917 257 aaKnown RBP6.92□□□□□ -1.3
LIMD1-201ENST00000273317 SLC35B1P78383 322 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 GAB4Q2WGN9 574 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 FADS6Q8N9I5 356 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 IL36RNQ9UBH0 155 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 TINAGQ9UJW2 476 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 ZDHHC8Q9ULC8 765 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 CCL27Q9Y4X3 112 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 FGF12P61328 243 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 TMEM177Q53S58 311 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 TTC32Q5I0X7 151 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 GCSAMLQ5JQS6 135 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 FAM209BQ5JX69 171 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 PKIBQ9C010 78 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 CACNA1HO95180 2353 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 HLA-DQB1P01920 261 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 VSIG10L2P0DP72 767 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 C1orf53Q5VUE5 145 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF385CQ66K41 422 aaPredicted RBP6.92□□□□□ -1.3
LIMD1-201ENST00000273317 LEMD1Q68G75 181 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 MDP1Q86V88 176 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 MS4A3Q96HJ5 214 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 ALKBH7Q9BT30 221 aaPredicted RBP6.92□□□□□ -1.3
LIMD1-201ENST00000273317 ASAH2BP0C7U1 165 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 GZMMP51124 257 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 PSG6Q00889 435 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 MMD2Q8IY49 270 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF721Q8TF20 911 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 QTRT1Q9BXR0 403 aaKnown RBP6.92□□□□□ -1.3
LIMD1-201ENST00000273317 C16orf97H3BN30 126 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 CXCL2P19875 107 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 ROM1Q03395 351 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 C9orf40Q8IXQ3 194 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 ABHD3Q8WU67 409 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 PTPRDP23468 1912 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 TSC2P49815 1807 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 TMEM91Q6ZNR0 172 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 SHISA5Q8N114 240 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 OR10S1Q8NGN2 331 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 R3HDMLQ9H3Y0 253 aa6.92□□□□□ -1.3
LIMD1-201ENST00000273317 MAGEA5P43359 124 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 C1orf210Q8IVY1 113 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 OR4D11Q8NGI4 311 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
LIMD1-201ENST00000273317 PLAC1Q9HBJ0 212 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 PHLDA3Q9Y5J5 127 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 VENTXO95231 258 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 NMBP08949 121 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 GLIPR1P48060 266 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 MAJINQ3KP22 176 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 TMEM190Q8WZ59 177 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 A0A0B4J293 547 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 WDR25Q64LD2 544 aaPredicted RBP6.91□□□□□ -1.3
LIMD1-201ENST00000273317 LINC00469Q8N7U9 141 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 ZNF324O75467 553 aaPredicted RBP6.91□□□□□ -1.3
LIMD1-201ENST00000273317 TSPAN13O95857 204 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 PRDX2P32119 198 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 AESQ08117 197 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 HIKESHIQ53FT3 197 aa6.91□□□□□ -1.3
LIMD1-201ENST00000273317 SMIM8Q96KF7 97 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms