RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 IGLV3-1P01715 115 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 FABP4P15090 132 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 MRPS11P82912 194 aaKnown RBP10.58□□□□□ -0.72
UBXN4-201ENST00000272638 OR4D5Q8NGN0 318 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 SNX22Q96L94 193 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 GINS3Q9BRX5 216 aa10.58□□□□□ -0.72
UBXN4-201ENST00000272638 ODAMA1E959 279 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 SRSF4Q08170 494 aaKnown RBP10.57□□□□□ -0.72
UBXN4-201ENST00000272638 SAXO1Q8IYX7 474 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 C15orf54Q8N8G6 183 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 KIAA1456Q9P272 454 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 MALRD1Q5VYJ5 2156 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 IGHV3-72A0A0B4J1Y9 119 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 SPSB4Q96A44 273 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 FAM210BQ96KR6 192 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 TNCP24821 2201 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 IGHV3-21A0A0B4J1V1 117 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 FAM90A27PA6NNH2 459 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 MEOX2P50222 304 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 LILRB1Q8NHL6 650 aaPredicted RBP10.57□□□□□ -0.72
UBXN4-201ENST00000272638 ZDHHC8Q9ULC8 765 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 NUP210LQ5VU65 1888 aa10.57□□□□□ -0.72
UBXN4-201ENST00000272638 MARCH11A6NNE9 402 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 TRGC2P03986 189 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 HSPB1P04792 205 aaKnown RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 PLA2G5P39877 138 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 CDC34P49427 236 aaPredicted RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 TNFRSF9Q07011 255 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 ACOT6Q3I5F7 207 aaPredicted RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 ZNF324BQ6AW86 544 aaPredicted RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 CRIP3Q6Q6R5 217 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 MRPL41Q8IXM3 137 aaKnown RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 TAF15Q92804 592 aaKnown RBP eCLIP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 LOXL4Q96JB6 756 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 CARHSP1Q9Y2V2 147 aaKnown RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 BTBD17A6NE02 478 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 CEACAM18A8MTB9 384 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 RPL30P62888 115 aaKnown RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 MDS2Q8NDY4 140 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 SSC4DQ8WTU2 575 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 RHOVQ96L33 236 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 TMEM56Q96MV1 263 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 CIB3Q96Q77 187 aaPredicted RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 TMEM147Q9BVK8 224 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 PLSCR2Q9NRY7 297 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 MRPS18CQ9Y3D5 142 aaKnown RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 TMEM56-RWDD3S4R434 201 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 TRAV20A0A0B4J274 112 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 LRRC30A6NM36 301 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 STUMQ69YW2 141 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 RCC1LQ96I51 464 aaKnown RBP10.56□□□□□ -0.72
UBXN4-201ENST00000272638 PTPRQQ9UMZ3 2332 aa10.56□□□□□ -0.72
UBXN4-201ENST00000272638 PGA5P0DJD9 388 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 WT1P19544 449 aaPredicted RBP10.55□□□□□ -0.72
UBXN4-201ENST00000272638 KIR2DL2P43627 348 aaPredicted RBP10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ERVFRD-1P60508 538 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 TFF3Q07654 80 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 COMMD5Q9GZQ3 224 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 IGHV2OR16-5A0A0B4J2B6 119 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 MDFIC2A0A1B0GVS7 189 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ZNF705FA8MVS1 300 aaPredicted RBP10.55□□□□□ -0.72
UBXN4-201ENST00000272638 CLDN34H7C241 214 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 OR5G3P0C626 314 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ZNF705DP0CH99 300 aaPredicted RBP10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ZNF705BP0CI00 300 aaPredicted RBP10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ID3Q02535 119 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ZNF66Q6ZN08 573 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ACP7Q6ZNF0 438 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 WDR86Q86TI4 376 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 PLA2G2EQ9NZK7 142 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 MGAQ8IWI9 3026 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ZNF320A2RRD8 509 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 FOXI3A8MTJ6 420 aaPredicted RBP10.55□□□□□ -0.72
UBXN4-201ENST00000272638 PRSS44E7EML9 344 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 IGKV1-5P01602 117 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 BCL2P10415 239 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 TMEM241Q24JQ0 296 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 COLCA1Q6ZS62 124 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ZNF645Q8N7E2 425 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ZNF251Q9BRH9 671 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 QTRT1Q9BXR0 403 aaKnown RBP10.55□□□□□ -0.72
UBXN4-201ENST00000272638 NKX6-3A6NJ46 265 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 EIF2S3P41091 472 aaKnown RBP10.55□□□□□ -0.72
UBXN4-201ENST00000272638 RNF212Q495C1 297 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 MIC13Q5XKP0 118 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 FAM216BQ8N7L0 139 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 HSD17B10Q99714 261 aaKnown RBP10.55□□□□□ -0.72
UBXN4-201ENST00000272638 PRO1933Q9H354 126 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ANAPC10Q9UM13 185 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 ACACBO00763 2458 aa10.55□□□□□ -0.72
UBXN4-201ENST00000272638 MLNRO43193 412 aa10.54□□□□□ -0.72
UBXN4-201ENST00000272638 RTP5Q14D33 572 aa10.54□□□□□ -0.72
UBXN4-201ENST00000272638 TMEM41BQ5BJD5 291 aa10.54□□□□□ -0.72
UBXN4-201ENST00000272638 GCSAMLQ5JQS6 135 aa10.54□□□□□ -0.72
UBXN4-201ENST00000272638 WDR82Q6UXN9 313 aa10.54□□□□□ -0.72
UBXN4-201ENST00000272638 LINC00596Q86U02 117 aa10.54□□□□□ -0.72
UBXN4-201ENST00000272638 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
UBXN4-201ENST00000272638 WFIKKN1Q96NZ8 548 aa10.54□□□□□ -0.72
UBXN4-201ENST00000272638 DSPP15924 2871 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms