RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 LSM10Q969L4 123 aaKnown RBP11.58□□□□□ -0.56
PRDM16-201ENST00000270722 RASL10BQ96S79 203 aa11.58□□□□□ -0.56
PRDM16-201ENST00000270722 PRR14Q9BWN1 585 aa11.58□□□□□ -0.56
PRDM16-201ENST00000270722 MTFP1Q9UDX5 166 aa11.58□□□□□ -0.56
PRDM16-201ENST00000270722 TIAM2Q8IVF5 1701 aa11.58□□□□□ -0.56
PRDM16-201ENST00000270722 PLPP2O43688 288 aa11.58□□□□□ -0.56
PRDM16-201ENST00000270722 CD74P04233 296 aa11.58□□□□□ -0.56
PRDM16-201ENST00000270722 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
PRDM16-201ENST00000270722 PLPP3O14495 311 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 ZNF250P15622 560 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 FMODQ06828 376 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 TMEM186Q96B77 213 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 RNF167Q9H6Y7 350 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 RNF115Q9Y4L5 304 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 FAM208BQ5VWN6 2430 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 RGPD4Q7Z3J3 1758 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 UBE2CO00762 179 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 HPRT1P00492 218 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 POLR2IP36954 125 aaKnown RBP11.57□□□□□ -0.56
PRDM16-201ENST00000270722 RPL34P49207 117 aaKnown RBP11.57□□□□□ -0.56
PRDM16-201ENST00000270722 KLF9Q13886 244 aaPredicted RBP11.57□□□□□ -0.56
PRDM16-201ENST00000270722 DTX2Q86UW9 622 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 SMIM14Q96QK8 99 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 PRSS2P07478 247 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 SGMS2Q8NHU3 365 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 SFT2D2O95562 160 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 B4GALNT1Q00973 533 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 ZNF880Q6PDB4 577 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 NPDC1Q9NQX5 325 aaPredicted RBP11.57□□□□□ -0.56
PRDM16-201ENST00000270722 GCM2O75603 506 aaPredicted RBP11.57□□□□□ -0.56
PRDM16-201ENST00000270722 ATP6V0CP27449 155 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 MDP1Q86V88 176 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 SPG11Q96JI7 2443 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 PCSK4Q6UW60 755 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 SSC4DQ8WTU2 575 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 IGHV5-51A0A0C4DH38 117 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 PSG5Q15238 335 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 STPG1Q5TH74 334 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 SPINK14Q6IE38 97 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 TOGARAM1Q9Y4F4 1720 aa11.57□□□□□ -0.56
PRDM16-201ENST00000270722 RRHO14718 337 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 SPINK4O60575 86 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 LGALS1P09382 135 aaKnown RBP11.56□□□□□ -0.56
PRDM16-201ENST00000270722 KLF12Q9Y4X4 402 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 HSPB1P04792 205 aaKnown RBP11.56□□□□□ -0.56
PRDM16-201ENST00000270722 ISXQ2M1V0 245 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 GLIPR1P48060 266 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 HSF4Q9ULV5 492 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 C9orf170A2RU37 121 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 MGST3O14880 152 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 RPL27AP46776 148 aaKnown RBP11.56□□□□□ -0.56
PRDM16-201ENST00000270722 RNF165Q6ZSG1 346 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 OVOL2Q9BRP0 275 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 SFXN3Q9BWM7 321 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 FZR1Q9UM11 496 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 CD300LDQ6UXZ3 194 aa11.56□□□□□ -0.56
PRDM16-201ENST00000270722 PMELP40967 661 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 FABP5Q01469 135 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 PTX4Q96A99 478 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 CCL19Q99731 98 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 DNAJB12Q9NXW2 375 aaKnown RBP11.55□□□□□ -0.56
PRDM16-201ENST00000270722 DOCK3Q8IZD9 2030 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 SBK3P0C264 359 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 HIST1H1AQ02539 215 aaPredicted RBP11.55□□□□□ -0.56
PRDM16-201ENST00000270722 C19orf24Q9BVV8 132 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 TRAV8-1A0A0A6YYK1 113 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 Q6ZS52 159 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 ABHD14AQ9BUJ0 271 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 SEMG1P04279 462 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 SP9P0CG40 484 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 RTN4RL2Q86UN3 420 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 J3KT08 172 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 RNASE1P07998 156 aaKnown RBP11.55□□□□□ -0.56
PRDM16-201ENST00000270722 LINC00303Q3SY05 128 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 TCF24Q7RTU0 167 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 KCNE5Q9UJ90 142 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 IGKV3-7A0A075B6H7 116 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 SLC25A35Q3KQZ1 300 aa11.55□□□□□ -0.56
PRDM16-201ENST00000270722 CTDSPLO15194 276 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 CSN3P07498 182 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 PRDX2P32119 198 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 PRSS8Q16651 343 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 ACSF3Q4G176 576 aaPredicted RBP11.54□□□□□ -0.56
PRDM16-201ENST00000270722 BCDIN3DQ7Z5W3 292 aaKnown RBP11.54□□□□□ -0.56
PRDM16-201ENST00000270722 MRPL18Q9H0U6 180 aaKnown RBP11.54□□□□□ -0.56
PRDM16-201ENST00000270722 C10orf128Q5T292 105 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 LINC01465Q8N7H1 131 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 HPXP02790 462 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 PAX2Q02962 417 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 SH2D5Q6ZV89 423 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 GAGE12BA1L429 117 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 KCNS1Q96KK3 526 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 ABHD1Q96SE0 405 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 DYSFO75923 2080 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 ORAI1Q96D31 301 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 G6PC2Q9NQR9 355 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 TRAV9-1A0A075B6T8 112 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 GFRA3O60609 400 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 BCL2P10415 239 aa11.54□□□□□ -0.56
PRDM16-201ENST00000270722 OR10J3Q5JRS4 329 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms