RNA–Protein interactions for RNA: ENST00000269967.3

CCDC97-201, Transcript of coiled-coil domain containing 97, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC97, Length 3,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97-201ENST00000269967 NCR3LG1Q68D85 454 aa11.15□□□□□ -0.62
CCDC97-201ENST00000269967 Q8NFD4 153 aa11.15□□□□□ -0.62
CCDC97-201ENST00000269967 DTD1Q8TEA8 209 aa11.15□□□□□ -0.62
CCDC97-201ENST00000269967 PATZ1Q9HBE1 687 aaKnown RBP11.15□□□□□ -0.62
CCDC97-201ENST00000269967 YIF1AO95070 293 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 CYB5R3P00387 301 aaPredicted RBP11.14□□□□□ -0.63
CCDC97-201ENST00000269967 IGLV2-14P01704 120 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 SNRPCP09234 159 aaKnown RBP11.14□□□□□ -0.63
CCDC97-201ENST00000269967 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 GATAD1Q8WUU5 269 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 SNRNP40Q96DI7 357 aaKnown RBP11.14□□□□□ -0.63
CCDC97-201ENST00000269967 NIT2Q9NQR4 276 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 ZNRD1Q9P1U0 126 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 TRBV23-1A0A0A0MS06 115 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 RNF212BA8MTL3 300 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 IQCF6A8MYZ5 107 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 CD200P41217 278 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 SELENOVP59797 346 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 TNFRSF9Q07011 255 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 RHEBQ15382 184 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 HMGN3Q15651 99 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 TGIF2LYQ8IUE0 185 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 LYG1Q8N1E2 194 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 CISD2Q8N5K1 135 aaKnown RBP11.14□□□□□ -0.63
CCDC97-201ENST00000269967 OR4F5Q8NH21 305 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 STARD4Q96DR4 205 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 OR4F4Q96R69 305 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 DCAF16Q9NXF7 216 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 TGIF2-C20orf24A0A0A6YYL0 155 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 CLDN14O95500 239 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 MT-ND4LP03901 98 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 GCSAMLQ5JQS6 135 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 MOB1BQ7L9L4 216 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 LINC00596Q86U02 117 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 CD177Q8N6Q3 437 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 OR4A16Q8NH70 328 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 RND1Q92730 232 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 RCC1LQ96I51 464 aaKnown RBP11.14□□□□□ -0.63
CCDC97-201ENST00000269967 ASCL3Q9NQ33 180 aa11.14□□□□□ -0.63
CCDC97-201ENST00000269967 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.14□□□□□ -0.63
CCDC97-201ENST00000269967 COL8A2P25067 703 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 TFF3Q07654 80 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 HABP2Q14520 560 aaPredicted RBP11.13□□□□□ -0.63
CCDC97-201ENST00000269967 ZNF146Q15072 292 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 FFAR4Q5NUL3 377 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 UTF1Q5T230 341 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 TNRC6BQ9UPQ9 1833 aaKnown RBP11.13□□□□□ -0.63
CCDC97-201ENST00000269967 MARCH11A6NNE9 402 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 RPS23P62266 143 aaKnown RBP11.13□□□□□ -0.63
CCDC97-201ENST00000269967 NKX6-1P78426 367 aaPredicted RBP11.13□□□□□ -0.63
CCDC97-201ENST00000269967 ABHD12Q8N2K0 398 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 ZNF645Q8N7E2 425 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 SSMEM1Q8WWF3 244 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 CCL13Q99616 98 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 SMIM7Q9BQ49 75 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 KIAA1456Q9P272 454 aa11.13□□□□□ -0.63
CCDC97-201ENST00000269967 NDUFA2O43678 99 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 ZNF737O75373 536 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 HBE1P02100 147 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 KLF3P57682 345 aaPredicted RBP11.12□□□□□ -0.63
CCDC97-201ENST00000269967 MSMPQ1L6U9 139 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 WDR25Q64LD2 544 aaPredicted RBP11.12□□□□□ -0.63
CCDC97-201ENST00000269967 R3HDM4Q96D70 268 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 UNKLQ9H9P5 680 aaKnown RBP11.12□□□□□ -0.63
CCDC97-201ENST00000269967 TRAV38-1A0A0B4J264 116 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 TMPRSS2O15393 492 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 REG1BP48304 166 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 ERVK11-1P61568 191 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 ICAM4Q14773 271 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 HAPLN4Q86UW8 402 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 ZNF525Q8N782 197 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 C15orf54Q8N8G6 183 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 TAF15Q92804 592 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC97-201ENST00000269967 QTRT1Q9BXR0 403 aaKnown RBP11.12□□□□□ -0.63
CCDC97-201ENST00000269967 ARV1Q9H2C2 271 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 SRP19P09132 144 aaKnown RBP11.12□□□□□ -0.63
CCDC97-201ENST00000269967 C10orf91Q5T1B1 145 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 C11orf53Q8IXP5 236 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 ZNF561Q8N587 486 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 COMMD1Q8N668 190 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 OR10G4Q8NGN3 311 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 OR10G9Q8NGN4 311 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 OR10G7Q8NGN6 311 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 H1FXQ92522 213 aaKnown RBP11.12□□□□□ -0.63
CCDC97-201ENST00000269967 TVP23CQ96ET8 276 aa11.12□□□□□ -0.63
CCDC97-201ENST00000269967 FAM157AC9JC47 383 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 GYPAP02724 150 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 MYOD1P15172 320 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 ERVK-16P61578 105 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 CABLES2Q9BTV7 478 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 A0A1W2PPV4 95 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 IGKV3-15P01624 115 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
CCDC97-201ENST00000269967 C22orf34Q6ZV56 151 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 CCL17Q92583 94 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 TRAV3A0A0B4J244 114 aa11.11□□□□□ -0.63
CCDC97-201ENST00000269967 PDLIM3Q53GG5 364 aaPredicted RBP11.11□□□□□ -0.63
CCDC97-201ENST00000269967 Q6ZS49 121 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms