RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 MANBALQ9NQG1 85 aa23.08■■□□□ 1.29
CBX4-201ENST00000269397 PSPNO60542 156 aa23.07■■□□□ 1.28
CBX4-201ENST00000269397 GCGP01275 180 aa23.07■■□□□ 1.28
CBX4-201ENST00000269397 ZNF709Q8N972 641 aa23.07■■□□□ 1.28
CBX4-201ENST00000269397 ATG101Q9BSB4 218 aa23.07■■□□□ 1.28
CBX4-201ENST00000269397 COL6A3P12111 3177 aa23.07■■□□□ 1.28
CBX4-201ENST00000269397 CELA3BP08861 270 aa23.07■■□□□ 1.28
CBX4-201ENST00000269397 PDLIM4P50479 330 aa23.07■■□□□ 1.28
CBX4-201ENST00000269397 BRWD1-AS2P59051 145 aa23.07■■□□□ 1.28
CBX4-201ENST00000269397 CXorf67Q86X51 503 aaPredicted RBP23.07■■□□□ 1.28
CBX4-201ENST00000269397 ANAPC16Q96DE5 110 aa23.07■■□□□ 1.28
CBX4-201ENST00000269397 MBNL3Q9NUK0 354 aaKnown RBP23.07■■□□□ 1.28
CBX4-201ENST00000269397 GGCTO75223 188 aaKnown RBP23.06■■□□□ 1.28
CBX4-201ENST00000269397 IGHEP01854 428 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 MSMO1Q15800 293 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 TMEM18Q96B42 140 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 FAM173AQ9BQD7 235 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 RTL8AQ9BWD3 113 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 TRAV38-1A0A0B4J264 116 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 RNF212BA8MTL3 300 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 SLC10A1Q14973 349 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 ZNF645Q8N7E2 425 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 OR2J1Q9GZK6 312 aa23.06■■□□□ 1.28
CBX4-201ENST00000269397 CTNNBIP1Q9NSA3 81 aaPredicted RBP23.06■■□□□ 1.28
CBX4-201ENST00000269397 IL3RAP26951 378 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 ATP5G3P48201 142 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 PAX5Q02548 391 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 CST9LP1Q5W188 147 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 TMPRSS7Q7RTY8 843 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 MCEMP1Q8IX19 187 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 DCAF12Q5T6F0 453 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 LINC00696Q6ZRV3 163 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 TTTY12Q9BZ98 90 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 MBP02144 154 aa23.05■■□□□ 1.28
CBX4-201ENST00000269397 A0A0U1RQK1 487 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 ZNF320A2RRD8 509 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 C12orf77C9JDV5 145 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 SH2D1BO14796 132 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 ERVK11-1P61568 191 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 AESQ08117 197 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 SSPNQ14714 243 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 TMEM204Q9BSN7 226 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 WIPI2Q9Y4P8 454 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 MED13Q9UHV7 2174 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 C1QTNF9P0C862 333 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 CNN1P51911 297 aaKnown RBP23.04■■□□□ 1.28
CBX4-201ENST00000269397 TMEM256Q8N2U0 113 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 B4GALT7Q9UBV7 327 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 TP53TG5Q9Y2B4 290 aa23.04■■□□□ 1.28
CBX4-201ENST00000269397 DSPP15924 2871 aaKnown RBP23.03■■□□□ 1.28
CBX4-201ENST00000269397 PRR14LQ5THK1 2151 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 WNT9BO14905 357 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 NDUFB4O95168 129 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 P0C879 139 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 RAC2P15153 192 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 CDC34P49427 236 aaPredicted RBP23.03■■□□□ 1.28
CBX4-201ENST00000269397 GNB1P62873 340 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 ATP6V1FQ16864 119 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 TEX38Q6PEX7 206 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 LINC01551Q86U37 167 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 CISD2Q8N5K1 135 aaKnown RBP23.03■■□□□ 1.28
CBX4-201ENST00000269397 TPRX1Q8N7U7 411 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 ZNF114Q8NC26 417 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 GALMQ96C23 342 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 IGHV3-43A0A0B4J1X8 118 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 SCGB1D1O95968 90 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 PDGFBP01127 241 aaPredicted RBP23.03■■□□□ 1.28
CBX4-201ENST00000269397 IGHV3-43DP0DP04 118 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 ACOT6Q3I5F7 207 aaPredicted RBP23.03■■□□□ 1.28
CBX4-201ENST00000269397 C6orf15Q6UXA7 325 aaPredicted RBP23.03■■□□□ 1.28
CBX4-201ENST00000269397 DBX2Q6ZNG2 339 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 TMEM105Q8N8V8 129 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 KCNIP1Q9NZI2 227 aa23.03■■□□□ 1.28
CBX4-201ENST00000269397 NUPR1O60356 82 aa23.02■■□□□ 1.28
CBX4-201ENST00000269397 SRP14P37108 136 aaKnown RBP23.02■■□□□ 1.28
CBX4-201ENST00000269397 KCNIP4Q6PIL6 250 aa23.02■■□□□ 1.28
CBX4-201ENST00000269397 ZNF826PQ6ZT77 177 aa23.02■■□□□ 1.28
CBX4-201ENST00000269397 TMEM251Q8N6I4 163 aa23.02■■□□□ 1.28
CBX4-201ENST00000269397 TRIOBPQ9H2D6 2365 aa23.02■■□□□ 1.28
CBX4-201ENST00000269397 FOSL1P15407 271 aa23.02■■□□□ 1.28
CBX4-201ENST00000269397 HNF1AP20823 631 aa23.02■■□□□ 1.28
CBX4-201ENST00000269397 PLGLB1Q02325 96 aa23.02■■□□□ 1.28
CBX4-201ENST00000269397 DEFB108AA8MXU0 73 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 TCAPO15273 167 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 HAND1O96004 215 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 EDDM3BP56851 147 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 ZNF124Q15973 351 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 TCF23Q7RTU1 214 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 H2BFWTQ7Z2G1 175 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 GBGT1Q8N5D6 347 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 MRGPRDQ8TDS7 321 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 CBLN4Q9NTU7 201 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 POLDIP2Q9Y2S7 368 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 LOXL2Q9Y4K0 774 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 TRAPPC1Q9Y5R8 145 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 OR1C1Q15619 314 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 ABHD17BQ5VST6 288 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 GP6Q9HCN6 339 aa23.01■■□□□ 1.27
CBX4-201ENST00000269397 HBZP02008 142 aa23■■□□□ 1.27
CBX4-201ENST00000269397 ZNF146Q15072 292 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms