RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 STARD4Q96DR4 205 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 SMAD7O15105 426 aaKnown RBP11.66□□□□□ -0.54
NPC1-201ENST00000269228 ZNF250P15622 560 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 CDKN1AP38936 164 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 CXorf66Q5JRM2 361 aaPredicted RBP11.66□□□□□ -0.54
NPC1-201ENST00000269228 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 UNQ6494/PRO21346Q6UXR6 183 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 OVCH2Q7RTZ1 564 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 GHITMQ9H3K2 345 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 C17orf100A8MU93 164 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 S100A8P05109 93 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 G0S2P27469 103 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 SPCS3P61009 180 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 C21orf62-AS1Q17RA5 79 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 RABAC1Q9UI14 185 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 RBFOX3A6NFN3 312 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 MMP7P09237 267 aaPredicted RBP11.66□□□□□ -0.54
NPC1-201ENST00000269228 RPS11P62280 158 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPC1-201ENST00000269228 ZCCHC24Q8N2G6 241 aaKnown RBP11.66□□□□□ -0.54
NPC1-201ENST00000269228 WBP1Q96G27 269 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 TMEM140Q9NV12 185 aa11.66□□□□□ -0.54
NPC1-201ENST00000269228 ANKRD55Q3KP44 614 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 UNQ5815/PRO19632Q6UWF5 114 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 GPR146Q96CH1 333 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 NPDC1Q9NQX5 325 aaPredicted RBP11.65□□□□□ -0.54
NPC1-201ENST00000269228 ATP6V0CP27449 155 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 CD1BP29016 333 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 ZNF818PQ6ZRF7 136 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 WFDC3Q8IUB2 231 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 FGFBP3Q8TAT2 258 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 C5orf66Q9H5L9 145 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 PKDREJQ9NTG1 2253 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 IQCF6A8MYZ5 107 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 LOXL3P58215 753 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 LCN2P80188 198 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 POC1AQ8NBT0 407 aa11.65□□□□□ -0.54
NPC1-201ENST00000269228 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.54
NPC1-201ENST00000269228 A0A087WV48 116 aa11.65□□□□□ -0.55
NPC1-201ENST00000269228 TRAF4Q9BUZ4 470 aaPredicted RBP11.65□□□□□ -0.55
NPC1-201ENST00000269228 TNFSF18Q9UNG2 199 aa11.65□□□□□ -0.55
NPC1-201ENST00000269228 PRR32B1ATL7 298 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 C11orf94C9JXX5 98 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 TMEM252Q8N6L7 170 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 PLXNA4Q9HCM2 1894 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 MARCH11A6NNE9 402 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 C12orf77C9JDV5 145 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 J3KRW8 73 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 S1PR2O95136 353 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 RUNX1Q01196 453 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 DRAM1Q8N682 238 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 TMEM186Q96B77 213 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 PCNX1Q96RV3 2341 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 GATCO43716 136 aaKnown RBP11.64□□□□□ -0.55
NPC1-201ENST00000269228 SNRPCP09234 159 aaKnown RBP11.64□□□□□ -0.55
NPC1-201ENST00000269228 ZP3P21754 424 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 WNT5AP41221 380 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 SLC16A13Q7RTY0 426 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 VKORC1L1Q8N0U8 176 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 MDS2Q8NDY4 140 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 DYNLRB2Q8TF09 96 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
NPC1-201ENST00000269228 MRPL37Q9BZE1 423 aaKnown RBP11.64□□□□□ -0.55
NPC1-201ENST00000269228 CBY1Q9Y3M2 126 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 CEACAM18A8MTB9 384 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 ZG16O60844 167 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 SELENOHQ8IZQ5 122 aaKnown RBP11.64□□□□□ -0.55
NPC1-201ENST00000269228 DCTN5Q9BTE1 182 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 RBKSQ9H477 322 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 NPVFQ9HCQ7 196 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 IL36RNQ9UBH0 155 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 ANAPC1Q9H1A4 1944 aa11.64□□□□□ -0.55
NPC1-201ENST00000269228 IGKV3D-15A0A087WSY6 115 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 SLC31A2O15432 143 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 OR10J1P30954 320 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 PCSK4Q6UW60 755 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 PITPNC1Q9UKF7 332 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 A0A0G2JK05 382 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 SNRPEP62304 92 aaKnown RBP11.63□□□□□ -0.55
NPC1-201ENST00000269228 SLC35E3Q7Z769 313 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 MANBALQ9NQG1 85 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 LY6G6EA0A0G2JKS1 128 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 OR2A4O95047 310 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 RNF212Q495C1 297 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 RPL39P5Q59GN2 51 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 DHRS7BQ6IAN0 325 aaPredicted RBP11.63□□□□□ -0.55
NPC1-201ENST00000269228 TEX29Q8N6K0 151 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 FAM168AQ92567 244 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 OR2A7Q96R45 310 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 NRIP2Q9BQI9 281 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 GAR1Q9NY12 217 aaKnown RBP11.63□□□□□ -0.55
NPC1-201ENST00000269228 ZNF319Q9P2F9 582 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 U3KQA8 63 aa11.63□□□□□ -0.55
NPC1-201ENST00000269228 ABCA4P78363 2273 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 PAGE4O60829 102 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 OR4C13Q8NGP0 309 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 OR10C1Q96KK4 312 aa11.62□□□□□ -0.55
NPC1-201ENST00000269228 LINC00052Q96N35 136 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms