RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ZNF788Q6ZQV5 615 aa7.75□□□□□ -1.17
SSR3-201ENST00000265044 LRRC20Q8TCA0 184 aa7.75□□□□□ -1.17
SSR3-201ENST00000265044 RPEQ96AT9 228 aa7.75□□□□□ -1.17
SSR3-201ENST00000265044 GAFA1Q96PS6 74 aa7.75□□□□□ -1.17
SSR3-201ENST00000265044 RAB40CQ96S21 281 aa7.75□□□□□ -1.17
SSR3-201ENST00000265044 SLC25A32Q9H2D1 315 aa7.75□□□□□ -1.17
SSR3-201ENST00000265044 C19orf12Q9NSK7 152 aa7.75□□□□□ -1.17
SSR3-201ENST00000265044 STRAPQ9Y3F4 350 aaKnown RBP7.75□□□□□ -1.17
SSR3-201ENST00000265044 ARFGEF3Q5TH69 2177 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 IGHV3-72A0A0B4J1Y9 119 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 PPIAL4CA0A0B4J2A2 164 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 PPIAL4GP0DN37 164 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 NQO2P16083 231 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 RPP30P78346 268 aaKnown RBP7.74□□□□□ -1.17
SSR3-201ENST00000265044 GPR157Q5UAW9 335 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 NCR3LG1Q68D85 454 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 ZNF66Q6ZN08 573 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 TGIF2LXQ8IUE1 241 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 OR2G3Q8NGZ4 309 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 RHOVQ96L33 236 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 COMMD5Q9GZQ3 224 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 TLNRD1Q9H1K6 362 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 SIRT7Q9NRC8 400 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 JKAMPQ9P055 326 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 DUXBA0A1W2PPF3 345 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.74□□□□□ -1.17
SSR3-201ENST00000265044 RAMP3O60896 148 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 APOC3P02656 99 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 PRRX1P54821 245 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 HTD2P86397 168 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 STUMQ69YW2 141 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 TMEM182Q6ZP80 229 aaPredicted RBP7.74□□□□□ -1.17
SSR3-201ENST00000265044 OR10P1Q8NGE3 313 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 SDSLQ96GA7 329 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 TSNAXQ99598 290 aaKnown RBP7.74□□□□□ -1.17
SSR3-201ENST00000265044 MARCH11A6NNE9 402 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 DFFBO76075 338 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 AKR1C1Q04828 323 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 BAXQ07812 192 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 ZNF345Q14585 488 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 ZNF273Q14593 569 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 ADTRPQ96IZ2 230 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 RNF126Q9BV68 326 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 LPAR3Q9UBY5 353 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 FBXO7Q9Y3I1 522 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 LINC00312Q9Y6C7 94 aa7.74□□□□□ -1.17
SSR3-201ENST00000265044 DBX1A6NMT0 343 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 TXNL1O43396 289 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 P2RY1P47900 373 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 BLOC1S1P78537 153 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 Q6ZPA2 131 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 THNSL2Q86YJ6 484 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 ABHD12Q8N2K0 398 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 NEIL1Q96FI4 390 aaPredicted RBP7.73□□□□□ -1.17
SSR3-201ENST00000265044 NAV2Q8IVL1 2488 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 DCHS1Q96JQ0 3298 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 RNF222A6NCQ9 220 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 YPEL1O60688 119 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 HPRT1P00492 218 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 OR8U8P0C7N1 319 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 THBS3P49746 956 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 GNB1P62873 340 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 EWSR1Q01844 656 aaKnown RBP eCLIP7.73□□□□□ -1.17
SSR3-201ENST00000265044 CDSNQ15517 529 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 STOML3Q8TAV4 291 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 TMEM56Q96MV1 263 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 CIB3Q96Q77 187 aaPredicted RBP7.73□□□□□ -1.17
SSR3-201ENST00000265044 YPEL2Q96QA6 119 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 MIOXQ9UGB7 285 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 TMA7Q9Y2S6 64 aaKnown RBP7.73□□□□□ -1.17
SSR3-201ENST00000265044 TMEM56-RWDD3S4R434 201 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 HKR1P10072 659 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 TMEM252Q8N6L7 170 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 FAM222BQ8WU58 562 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 NEU4Q8WWR8 484 aaPredicted RBP7.73□□□□□ -1.17
SSR3-201ENST00000265044 C18orf12Q96KH6 178 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 HARBI1Q96MB7 349 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 AIFM2Q9BRQ8 373 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 PCGF1Q9BSM1 259 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 MMP24Q9Y5R2 645 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 INSIG2Q9Y5U4 225 aa7.73□□□□□ -1.17
SSR3-201ENST00000265044 DYNLT3P51808 116 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 ELLP55199 621 aaPredicted RBP7.72□□□□□ -1.17
SSR3-201ENST00000265044 UBE2KP61086 200 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 RAB11AP62491 216 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 RPL30P62888 115 aaKnown RBP7.72□□□□□ -1.17
SSR3-201ENST00000265044 CLLU1Q5K131 121 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 DTD1Q8TEA8 209 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 DOPEY2Q9Y3R5 2298 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 CNIH1O95406 144 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 MEF2CQ06413 473 aaPredicted RBP7.72□□□□□ -1.17
SSR3-201ENST00000265044 PDLIM3Q53GG5 364 aaPredicted RBP7.72□□□□□ -1.17
SSR3-201ENST00000265044 ZNF880Q6PDB4 577 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 IL22RA2Q969J5 263 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 FAM210AQ96ND0 272 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 CREBBPQ92793 2442 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 DSCAMO60469 2012 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 KIR2DS2P43631 304 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 TMEM200BQ69YZ2 307 aa7.72□□□□□ -1.17
SSR3-201ENST00000265044 Q6ZRG5 221 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms