RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 IGKV1-13P0DP09 117 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 IZUMO4Q1ZYL8 232 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 TMPRSS7Q7RTY8 843 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 TCTEX1D1Q8N7M0 179 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 TMEM105Q8N8V8 129 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 OR10G9Q8NGN4 311 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 OR10G7Q8NGN6 311 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 NUDT11Q96G61 164 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 RPH3ALQ9UNE2 315 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 TBL2Q9Y4P3 447 aaKnown RBP11.12□□□□□ -0.63
NUP54-201ENST00000264883 A0A1W2PR80 420 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 SLC22A20A6NK97 555 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 DNPH1O43598 174 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 GDF9O60383 454 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 SLC25A6P12236 298 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 EGR1P18146 543 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 KITLGP21583 273 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
NUP54-201ENST00000264883 PHYHD1Q5SRE7 291 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 OR5P3Q8WZ94 311 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 SF3B5Q9BWJ5 86 aaKnown RBP11.12□□□□□ -0.63
NUP54-201ENST00000264883 NRN1Q9NPD7 142 aa11.12□□□□□ -0.63
NUP54-201ENST00000264883 SYNGR3O43761 229 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 ZNF253O75346 499 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 KRTAP27-1Q3LI81 207 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 OR1F12Q8NHA8 337 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 SAP25Q8TEE9 199 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 DEFB126Q9BYW3 111 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 RBM7Q9Y580 266 aaKnown RBP11.11□□□□□ -0.63
NUP54-201ENST00000264883 DOCK11Q5JSL3 2073 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 UNC13CQ8NB66 2214 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 ARHGAP21Q5T5U3 1957 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 IGKV1-12A0A0C4DH73 117 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 PGPEP1LA6NFU8 196 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 RNF212BA8MTL3 300 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 PGLYRP1O75594 196 aaPredicted RBP11.11□□□□□ -0.63
NUP54-201ENST00000264883 IGKV1D-12P01611 117 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 CTXN2P0C2S0 81 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 GNB1P62873 340 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 ZNF90Q03938 601 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 SLC38A11Q08AI6 406 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 Q6ZRM9 215 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 OR56B2PQ8NGI1 322 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 OR6C1Q96RD1 312 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 LRFN3Q9BTN0 628 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 CACNG5Q9UF02 275 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 CDC42EP3Q9UKI2 254 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 MYO15AQ9UKN7 3530 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 FRYLO94915 3013 aa11.11□□□□□ -0.63
NUP54-201ENST00000264883 LY6G6EA0A0G2JKS1 128 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 IGHV1-69-2A0A0G2JMI3 117 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 GJE1A6NN92 205 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.63
NUP54-201ENST00000264883 CRYAAP02489 173 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 SERPINE2P07093 398 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 MYF5P13349 255 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 HLA-BQ31612 363 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 ZNF114Q8NC26 417 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 CHCHD2Q9Y6H1 151 aaPredicted RBP11.1□□□□□ -0.63
NUP54-201ENST00000264883 U3KQA8 63 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 FER1L5A0AVI2 2057 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 TTC28Q96AY4 2481 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 IGHV2-26A0A0B4J1V2 119 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 CD300LBA8K4G0 201 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 FCN1O00602 326 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 PDE6DO43924 150 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 NDUFB4O95168 129 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 NAPSAO96009 420 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 F2RP25116 425 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 AMTP48728 403 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 DSCR4P56555 118 aaPredicted RBP11.1□□□□□ -0.63
NUP54-201ENST00000264883 PMP22Q01453 160 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 Q8NFD4 153 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 DERL1Q9BUN8 251 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 DUSP23Q9BVJ7 150 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 WNT10AQ9GZT5 417 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 FSCN3Q9NQT6 498 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 CLN8Q9UBY8 286 aa11.1□□□□□ -0.63
NUP54-201ENST00000264883 WDR87Q6ZQQ6 2873 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 ZNF816-ZNF321PA0A0X1KG74 233 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 DPRXA6NFQ7 191 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 OR7C1O76099 320 aaPredicted RBP11.09□□□□□ -0.63
NUP54-201ENST00000264883 SCTP09683 121 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 S100GP29377 79 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 CLDN15P56746 228 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 RPS20P60866 119 aaKnown RBP11.09□□□□□ -0.63
NUP54-201ENST00000264883 OR1K1Q8NGR3 316 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 OR5B3Q8NH48 314 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 RALGAPA1Q6GYQ0 2036 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 KIR2DS1A0A191URI9 304 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 A0A1W2PRS3 328 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 IGLC7A0M8Q6 106 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 OR5B21A6NL26 309 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 PSG2P11465 335 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 KIR2DS4P43632 304 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 PCBD1P61457 104 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 RHOGP84095 191 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 PSG4Q00888 419 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 KIR2DS1Q14954 304 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms