RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PRR18Q8N4B5 295 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 SLC35E1Q96K37 410 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 LY96Q9Y6Y9 160 aa10.43□□□□□ -0.74
CHMP2B-201ENST00000263780 ODAMA1E959 279 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 J3QT63 122 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 SELEP16581 610 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 MLF1P58340 268 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 UBE2G2P60604 165 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 SUMO1P63165 101 aaKnown RBP10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 ARF1P84077 181 aaKnown RBP10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 Q6P435 159 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 TCF23Q7RTU1 214 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 OR1L1Q8NH94 360 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 ZNF552Q9H707 407 aaPredicted RBP10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 AURKAIP1Q9NWT8 199 aaPredicted RBP10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 KCNIP1Q9NZI2 227 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 WDR83OSQ9Y284 106 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 ASXL3Q9C0F0 2248 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 CLDN14O95500 239 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 CXorf1O96002 111 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 CELA2AP08217 269 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 G6PCP35575 357 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 ARR3P36575 388 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 ANKRD39Q53RE8 183 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 ZNF488Q96MN9 340 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 ASCL3Q9NQ33 180 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 MBNL3Q9NUK0 354 aaKnown RBP10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 UQCR10Q9UDW1 63 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 SLC45A2Q9UMX9 530 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 ADAMTS20P59510 1910 aa10.42□□□□□ -0.74
CHMP2B-201ENST00000263780 RBFOX2O43251 390 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 SS18L1O75177 396 aaPredicted RBP10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 MT-ND6P03923 174 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 CHRNB4P30926 498 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 PLP2Q04941 152 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 TDRG1Q3Y452 100 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 H2BFWTQ7Z2G1 175 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 MYPOPQ86VE0 399 aaPredicted RBP10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 C11orf42Q8N5U0 333 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 TAAR6Q96RI8 345 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 CRIM1Q9NZV1 1036 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 TP53TG3Q9ULZ0 132 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 TRANK1O15050 2925 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 IGHV5-10-1A0A0J9YXX1 117 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 FCN1O00602 326 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 ZG16O60844 167 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 RBMXL2O75526 392 aaKnown RBP10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 MT-CO2P00403 227 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 COX6A1P12074 109 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 EGR1P18146 543 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 EN2P19622 333 aaPredicted RBP10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 CBLN1P23435 193 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 CD1BP29016 333 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 WDR73Q6P4I2 378 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 KLHDC1Q8N7A1 406 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 WDR31Q8NA23 367 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 OR1L6Q8NGR2 347 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 DERL1Q9BUN8 251 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 GNB1LQ9BYB4 327 aa10.41□□□□□ -0.74
CHMP2B-201ENST00000263780 C20orf202A1L168 122 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 C2CD4DB7Z1M9 353 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 OPRK1P41145 380 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 C21orf62-AS1Q17RA5 79 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 FBXW9Q5XUX1 488 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 C1orf174Q8IYL3 243 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 ZNF114Q8NC26 417 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 ORAOV1Q8WV07 137 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 DNAJC4Q9NNZ3 241 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 POLDIP2Q9Y2S7 368 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 TRAV39A0A0B4J263 110 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 DIRC3C9JPN6 131 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 SH2D1BO14796 132 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 GALR2O43603 387 aaPredicted RBP10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 TCF21O43680 179 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 CDKN1AP38936 164 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 TGFBR3Q03167 851 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 ZNF816Q0VGE8 651 aaPredicted RBP10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 IGFBP7Q16270 282 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 RPEL1Q2QD12 228 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 HLA-DRB5Q30154 266 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 OR10J3Q5JRS4 329 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 OCC1Q8TAD7 63 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 UHRF2Q96PU4 802 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 DUSP23Q9BVJ7 150 aa10.4□□□□□ -0.74
CHMP2B-201ENST00000263780 IGKV3D-15A0A087WSY6 115 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 SAA2-SAA4A0A096LPE2 208 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 A0A1W2PR80 420 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 FAM166BA8MTA8 275 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 GPX1P07203 203 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 CD33P20138 364 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 LGALS4P56470 323 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 LINC00310P59036 64 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 HTD2P86397 168 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 TRIP6Q15654 476 aaKnown RBP10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 GALMQ96C23 342 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 ZNF703Q9H7S9 590 aaPredicted RBP10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 ABCA7Q8IZY2 2146 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 TNRC6AQ8NDV7 1962 aaKnown RBP10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 TRAV38-1A0A0B4J264 116 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 C9JCJ5 164 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms