RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FBLN7Q53RD9 439 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 LYG1Q8N1E2 194 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 OR2AK2Q8NG84 335 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 OR4C16Q8NGL9 310 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 TOMM40LQ969M1 308 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 RPEQ96AT9 228 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 YPEL2Q96QA6 119 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 IFT46Q9NQC8 304 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 RDH8Q9NYR8 311 aa14.79□□□□□ -0.04
SDF4-201ENST00000263741 AMMECR1Q9Y4X0 333 aaPredicted RBP14.79□□□□□ -0.04
SDF4-201ENST00000263741 RLN1P04808 185 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 IER3P46695 156 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 Q6ZS49 121 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 OCSTAMPQ9BR26 566 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 IFI27L2Q9H2X8 130 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 PIPOXQ9P0Z9 390 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 ANXA10Q9UJ72 324 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 SULT1C2O00338 296 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 RRASP10301 218 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 NFYAP23511 347 aaPredicted RBP14.78□□□□□ -0.04
SDF4-201ENST00000263741 UBA52P62987 128 aaKnown RBP14.78□□□□□ -0.04
SDF4-201ENST00000263741 LRRC75BQ2VPJ9 315 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 HOGA1Q86XE5 327 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 LINC00311Q8N616 119 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 ABHD14BQ96IU4 210 aa14.78□□□□□ -0.04
SDF4-201ENST00000263741 TRBV6-7A0A0A0MS04 114 aa14.77□□□□□ -0.04
SDF4-201ENST00000263741 HSD17B6O14756 317 aa14.77□□□□□ -0.04
SDF4-201ENST00000263741 SRSF7Q16629 238 aaKnown RBP eCLIP14.77□□□□□ -0.042e-11■■■■■ 40.5
SDF4-201ENST00000263741 ODF3L1Q8IXM7 274 aa14.77□□□□□ -0.04
SDF4-201ENST00000263741 C8orf31Q8N9H6 132 aa14.77□□□□□ -0.04
SDF4-201ENST00000263741 OR10J5Q8NHC4 309 aa14.77□□□□□ -0.04
SDF4-201ENST00000263741 GPX8Q8TED1 209 aa14.77□□□□□ -0.04
SDF4-201ENST00000263741 SSMEM1Q8WWF3 244 aa14.77□□□□□ -0.04
SDF4-201ENST00000263741 MEGF9Q9H1U4 602 aa14.77□□□□□ -0.04
SDF4-201ENST00000263741 RNF150Q9ULK6 438 aa14.77□□□□□ -0.04
SDF4-201ENST00000263741 LPLP06858 475 aa14.77□□□□□ -0.05
SDF4-201ENST00000263741 CEACAM3P40198 252 aa14.77□□□□□ -0.05
SDF4-201ENST00000263741 AANATQ16613 207 aa14.77□□□□□ -0.05
SDF4-201ENST00000263741 SAA2-SAA4A0A096LPE2 208 aa14.76□□□□□ -0.05
SDF4-201ENST00000263741 A0A1W2PPI3 338 aa14.76□□□□□ -0.05
SDF4-201ENST00000263741 HMSDA8MTL9 139 aa14.76□□□□□ -0.05
SDF4-201ENST00000263741 SAA2P0DJI9 122 aaPredicted RBP14.76□□□□□ -0.05
SDF4-201ENST00000263741 TAS2R19P59542 299 aa14.76□□□□□ -0.05
SDF4-201ENST00000263741 Q3ZCU0 254 aa14.76□□□□□ -0.05
SDF4-201ENST00000263741 PIFOQ8TCI5 191 aa14.76□□□□□ -0.05
SDF4-201ENST00000263741 SCPEP1Q9HB40 452 aa14.76□□□□□ -0.05
SDF4-201ENST00000263741 IGHV3-72A0A0B4J1Y9 119 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 RPL39P5Q59GN2 51 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 TMEM219Q86XT9 240 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 ST6GALNAC6Q969X2 333 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 JMJD8Q96S16 334 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 ANAPC10Q9UM13 185 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 TIMM23O14925 209 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 CFDP00746 253 aaPredicted RBP14.75□□□□□ -0.05
SDF4-201ENST00000263741 VSIG10L2P0DP72 767 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 CXCL2P19875 107 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 S100A11P31949 105 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 CBX5P45973 191 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 STEAP1BQ6NZ63 245 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 C11orf88Q6PI97 169 aa14.75□□□□□ -0.05
SDF4-201ENST00000263741 H1FOOQ8IZA3 346 aaPredicted RBP14.75□□□□□ -0.05
SDF4-201ENST00000263741 RTN4IP1Q8WWV3 396 aaPredicted RBP14.75□□□□□ -0.05
SDF4-201ENST00000263741 OR8U9P0C7N5 309 aa14.74□□□□□ -0.05
SDF4-201ENST00000263741 KRTAP24-1Q3LI83 254 aa14.74□□□□□ -0.05
SDF4-201ENST00000263741 DRAM1Q8N682 238 aa14.74□□□□□ -0.05
SDF4-201ENST00000263741 OR8U1Q8NH10 309 aa14.74□□□□□ -0.05
SDF4-201ENST00000263741 AGMATQ9BSE5 352 aa14.74□□□□□ -0.05
SDF4-201ENST00000263741 COL6A5A8TX70 2615 aa14.74□□□□□ -0.05
SDF4-201ENST00000263741 BTBD17A6NE02 478 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 GOSR2O14653 212 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 B3GALNT1O75752 331 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 PMP2P02689 132 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 IL3RAP26951 378 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 C4orf46Q504U0 113 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.73□□□□□ -0.05
SDF4-201ENST00000263741 TMEM229BQ8NBD8 167 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 OR51S1Q8NGJ8 323 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 OR52B4Q8NGK2 314 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 EDARADDQ8WWZ3 215 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 RBPMSQ93062 196 aaKnown RBP14.73□□□□□ -0.05
SDF4-201ENST00000263741 OR2D2Q9H210 308 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 ZNF107Q9UII5 783 aaPredicted RBP14.73□□□□□ -0.05
SDF4-201ENST00000263741 VPREB3Q9UKI3 123 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 IGHV1-3A0A0C4DH29 117 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 ZNF736B4DX44 427 aaPredicted RBP14.73□□□□□ -0.05
SDF4-201ENST00000263741 ZNF137PP52743 207 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 LY6G6FQ5SQ64 297 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 MOB3BQ86TA1 216 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 TGIF2LXQ8IUE1 241 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 CFHR4Q92496 578 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 SLC25A21Q9BQT8 299 aaPredicted RBP14.73□□□□□ -0.05
SDF4-201ENST00000263741 MRPL20Q9BYC9 149 aaKnown RBP14.73□□□□□ -0.05
SDF4-201ENST00000263741 ALX4Q9H161 411 aaPredicted RBP14.73□□□□□ -0.05
SDF4-201ENST00000263741 MED9Q9NWA0 146 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 POMT1Q9Y6A1 747 aa14.73□□□□□ -0.05
SDF4-201ENST00000263741 FXYD6-FXYD2A0A087WZ82 144 aa14.72□□□□□ -0.05
SDF4-201ENST00000263741 CHST1O43916 411 aa14.72□□□□□ -0.05
SDF4-201ENST00000263741 RNASE1P07998 156 aaKnown RBP14.72□□□□□ -0.05
SDF4-201ENST00000263741 ZNF816Q0VGE8 651 aaPredicted RBP14.72□□□□□ -0.05
SDF4-201ENST00000263741 OR5AP2Q8NGF4 316 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms