RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 IGHV3-35A0A0C4DH35 117 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 RPL31P62899 125 aaKnown RBP10.38□□□□□ -0.75
SMG6-201ENST00000263073 QTRT1Q9BXR0 403 aaKnown RBP10.38□□□□□ -0.75
SMG6-201ENST00000263073 FAM206AQ9NX38 181 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 STAG3L2P0CL84 134 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 SCGB1A1P11684 91 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 EMP1P54849 157 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 FGF12P61328 243 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 SLC25A34Q6PIV7 304 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 OR5R1Q8NH85 324 aa10.38□□□□□ -0.75
SMG6-201ENST00000263073 SRSF12Q8WXF0 261 aaKnown RBP10.38□□□□□ -0.75
SMG6-201ENST00000263073 NPDC1Q9NQX5 325 aaPredicted RBP10.38□□□□□ -0.75
SMG6-201ENST00000263073 TRBV5-7A0A0A0MS05 114 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 NUDT3O95989 172 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 GPR6P46095 362 aaPredicted RBP10.37□□□□□ -0.75
SMG6-201ENST00000263073 CRYBA2P53672 197 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 ZXDCQ2QGD7 858 aaPredicted RBP10.37□□□□□ -0.75
SMG6-201ENST00000263073 SLC22A18ASQ8N1D0 253 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 MAFAQ8NHW3 353 aaPredicted RBP10.37□□□□□ -0.75
SMG6-201ENST00000263073 SFRP2Q96HF1 295 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 FAM117AQ9C073 453 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 CCDC88CQ9P219 2028 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 KIF13BQ9NQT8 1826 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 NPIPB8E9PQR5 432 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 RRHO14718 337 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 RAMP1O60894 148 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 IL9P15248 144 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 ZNF708P17019 499 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 TTTY12Q9BZ98 90 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 PIKFYVEQ9Y2I7 2098 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 TMEM187Q14656 261 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 C18orf15Q96N68 181 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 G6PC2Q9NQR9 355 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 TUBGCP6Q96RT7 1819 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 A0A087WV48 116 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 BMI1P35226 326 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 ADIPOQQ15848 244 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 POC1AQ8NBT0 407 aa10.37□□□□□ -0.75
SMG6-201ENST00000263073 MRPL13Q9BYD1 178 aaKnown RBP10.37□□□□□ -0.75
SMG6-201ENST00000263073 KIAA0100Q14667 2235 aaKnown RBP10.37□□□□□ -0.75
SMG6-201ENST00000263073 IGHV3OR16-12A0A075B7B8 117 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 A8MWL6 223 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 TMEM229AB2RXF0 380 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 CD3EP07766 207 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 FCGR2BP31994 310 aaPredicted RBP10.36□□□□□ -0.75
SMG6-201ENST00000263073 MAS1LP35410 378 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 EFNB1P98172 346 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 TRA2AQ13595 282 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMG6-201ENST00000263073 MBNL2Q5VZF2 373 aaKnown RBP10.36□□□□□ -0.75
SMG6-201ENST00000263073 DMRTA2Q96SC8 542 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 ZNF256Q9Y2P7 627 aaPredicted RBP10.36□□□□□ -0.75
SMG6-201ENST00000263073 OTOFQ9HC10 1997 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 TAS2R60P59551 318 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 PET117Q6UWS5 81 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 KCNK17Q96T54 332 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 DNAJC13O75165 2243 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 SCN2AQ99250 2005 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 RND2P52198 227 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 ARF6P62330 175 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 FBXW9Q5XUX1 488 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 C1QL2Q7Z5L3 287 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 FAM19A2Q8N3H0 131 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 ZNF418Q8TF45 676 aaPredicted RBP10.36□□□□□ -0.75
SMG6-201ENST00000263073 S4R3C0 116 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 SPTBP11277 2137 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 P2RY6Q15077 328 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 RAB1BQ9H0U4 201 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 ROM1Q03395 351 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 MMD2Q8IY49 270 aa10.36□□□□□ -0.75
SMG6-201ENST00000263073 METTL1Q9UBP6 276 aaKnown RBP10.36□□□□□ -0.75
SMG6-201ENST00000263073 K7N7A8 449 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 THY1P04216 161 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 LRRC75BQ2VPJ9 315 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 FOLR2P14207 255 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 TNFRSF9Q07011 255 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 PRSS8Q16651 343 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 PRR31Q5SQ13 230 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 TMEM74BQ9NUR3 256 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 ZNF646O15015 1829 aaPredicted RBP10.35□□□□□ -0.75
SMG6-201ENST00000263073 DLEC1Q9Y238 1755 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 IGKV1D-42A0A075B6H8 117 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 CDX4O14627 284 aaPredicted RBP10.35□□□□□ -0.75
SMG6-201ENST00000263073 ISG15P05161 165 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 PRSS2P07478 247 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 TRIP6Q15654 476 aaKnown RBP10.35□□□□□ -0.75
SMG6-201ENST00000263073 GCSAMLQ5JQS6 135 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 IGHV3-23P01764 117 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 FAM27BQ5VT28 67 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 ZBTB34Q8NCN2 500 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 PRR7Q8TB68 274 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 RAB1CQ92928 201 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 KCNS1Q96KK3 526 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 WNT5BQ9H1J7 359 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 DLL3Q9NYJ7 618 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 IGKV3OR2-268A0A0C4DH90 116 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 UCP2P55851 309 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 C12orf54Q6X4T0 127 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 TCF23Q7RTU1 214 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 LINC00596Q86U02 117 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 TMEM183AQ8IXX5 376 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms