RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NCR3LG1Q68D85 454 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 NSG2Q9Y328 171 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 A6NNC1 897 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 S1PR2O95136 353 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 RAB7AP51149 207 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 LINC00518Q8N0U6 118 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 CACNG5Q9UF02 275 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 A0A1B0GU03 582 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 DAOP14920 347 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 CDKN1AP38936 164 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 UBA52P62987 128 aaKnown RBP18.38■□□□□ 0.53
SIX3-201ENST00000260653 ZNF843Q8N446 348 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 ZC4H2Q9NQZ6 224 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 SAA2-SAA4A0A096LPE2 208 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 PITX3O75364 302 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 FSTL3O95633 263 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 SAA2P0DJI9 122 aaPredicted RBP18.38■□□□□ 0.53
SIX3-201ENST00000260653 TMEM30BQ3MIR4 351 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 HEPN1Q6WQI6 88 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 NEU4Q8WWR8 484 aaPredicted RBP18.38■□□□□ 0.53
SIX3-201ENST00000260653 ZNRD1Q9P1U0 126 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 LPAR3Q9UBY5 353 aa18.38■□□□□ 0.53
SIX3-201ENST00000260653 SSSCA1O60232 199 aa18.37■□□□□ 0.53
SIX3-201ENST00000260653 KRASP01116 189 aa18.37■□□□□ 0.53
SIX3-201ENST00000260653 ID3Q02535 119 aa18.37■□□□□ 0.53
SIX3-201ENST00000260653 ODF3L1Q8IXM7 274 aa18.37■□□□□ 0.53
SIX3-201ENST00000260653 RPS10-NUDT3A0A1W2PQS6 291 aa18.37■□□□□ 0.53
SIX3-201ENST00000260653 SLC25A6P12236 298 aa18.37■□□□□ 0.53
SIX3-201ENST00000260653 G6PCP35575 357 aa18.37■□□□□ 0.53
SIX3-201ENST00000260653 CYTL1Q9NRR1 136 aa18.37■□□□□ 0.53
SIX3-201ENST00000260653 CLEC9AQ6UXN8 241 aa18.36■□□□□ 0.53
SIX3-201ENST00000260653 ZNF841Q6ZN19 808 aa18.36■□□□□ 0.53
SIX3-201ENST00000260653 LYG1Q8N1E2 194 aa18.36■□□□□ 0.53
SIX3-201ENST00000260653 C11orf1Q9H5F2 150 aa18.36■□□□□ 0.53
SIX3-201ENST00000260653 PPIHO43447 177 aaKnown RBP18.35■□□□□ 0.53
SIX3-201ENST00000260653 C1QL1O75973 258 aa18.35■□□□□ 0.53
SIX3-201ENST00000260653 TCTEX1D1Q8N7M0 179 aa18.35■□□□□ 0.53
SIX3-201ENST00000260653 PLEKHA2Q9HB19 425 aa18.35■□□□□ 0.53
SIX3-201ENST00000260653 RAB29O14966 203 aa18.35■□□□□ 0.53
SIX3-201ENST00000260653 MRPS11P82912 194 aaKnown RBP18.35■□□□□ 0.53
SIX3-201ENST00000260653 SLC25A48Q6ZT89 311 aaKnown RBP18.35■□□□□ 0.53
SIX3-201ENST00000260653 OR10A7Q8NGE5 316 aa18.35■□□□□ 0.53
SIX3-201ENST00000260653 SCARB1Q8WTV0 552 aa18.35■□□□□ 0.53
SIX3-201ENST00000260653 FAM212BQ9NTI7 297 aaPredicted RBP18.35■□□□□ 0.53
SIX3-201ENST00000260653 FCGR3BO75015 233 aa18.34■□□□□ 0.53
SIX3-201ENST00000260653 NDUFS7O75251 213 aa18.34■□□□□ 0.53
SIX3-201ENST00000260653 ATF4P18848 351 aaPredicted RBP18.34■□□□□ 0.53
SIX3-201ENST00000260653 P2RY1P47900 373 aa18.34■□□□□ 0.53
SIX3-201ENST00000260653 TMEM155Q4W5P6 130 aa18.34■□□□□ 0.53
SIX3-201ENST00000260653 ZNF251Q9BRH9 671 aa18.34■□□□□ 0.53
SIX3-201ENST00000260653 GSX2Q9BZM3 304 aa18.34■□□□□ 0.53
SIX3-201ENST00000260653 MMP24Q9Y5R2 645 aa18.34■□□□□ 0.53
SIX3-201ENST00000260653 KIAA1324LA8MWY0 1029 aaPredicted RBP18.34■□□□□ 0.53
SIX3-201ENST00000260653 DLX6P56179 175 aa18.34■□□□□ 0.53
SIX3-201ENST00000260653 TMEM33P57088 247 aa18.33■□□□□ 0.53
SIX3-201ENST00000260653 BSCL2Q96G97 398 aaPredicted RBP18.33■□□□□ 0.53
SIX3-201ENST00000260653 NARFLQ9H6Q4 476 aa18.33■□□□□ 0.53
SIX3-201ENST00000260653 FBXL17Q9UF56 701 aa18.33■□□□□ 0.53
SIX3-201ENST00000260653 GAB2Q9UQC2 676 aa18.33■□□□□ 0.53
SIX3-201ENST00000260653 TMEM50AO95807 157 aa18.33■□□□□ 0.52
SIX3-201ENST00000260653 P0C879 139 aa18.33■□□□□ 0.52
SIX3-201ENST00000260653 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.33■□□□□ 0.52
SIX3-201ENST00000260653 TIMD4Q96H15 378 aa18.33■□□□□ 0.52
SIX3-201ENST00000260653 SMIM3Q9BZL3 60 aa18.33■□□□□ 0.52
SIX3-201ENST00000260653 WRBO00258 174 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 SSTP61278 116 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 S100A12P80511 92 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 C21orf62-AS1Q17RA5 79 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 STOML3Q8TAV4 291 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 RAB1CQ92928 201 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 TACC2O95359 2948 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 TRBV23-1A0A0A0MS06 115 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 CHST1O43916 411 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 PVALBP20472 110 aaPredicted RBP18.32■□□□□ 0.52
SIX3-201ENST00000260653 CLLU1Q5K131 121 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 CD300LFQ8TDQ1 290 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 CHODLQ9H9P2 273 aa18.32■□□□□ 0.52
SIX3-201ENST00000260653 GPR137BO60478 399 aa18.31■□□□□ 0.52
SIX3-201ENST00000260653 CAV2P51636 162 aa18.31■□□□□ 0.52
SIX3-201ENST00000260653 FAM74A1Q5RGS3 127 aa18.31■□□□□ 0.52
SIX3-201ENST00000260653 OR2C3Q8N628 320 aa18.31■□□□□ 0.52
SIX3-201ENST00000260653 DDB2Q92466 427 aa18.31■□□□□ 0.52
SIX3-201ENST00000260653 UTP20O75691 2785 aaKnown RBP18.31■□□□□ 0.52
SIX3-201ENST00000260653 FAM24AA6NFZ4 105 aa18.31■□□□□ 0.52
SIX3-201ENST00000260653 MARCH11A6NNE9 402 aa18.31■□□□□ 0.52
SIX3-201ENST00000260653 SHOXO15266 292 aa18.31■□□□□ 0.52
SIX3-201ENST00000260653 RAB14P61106 215 aa18.31■□□□□ 0.52
SIX3-201ENST00000260653 RPL7L1Q6DKI1 246 aaKnown RBP18.31■□□□□ 0.52
SIX3-201ENST00000260653 LRRK2Q5S007 2527 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 TPT1P13693 172 aaKnown RBP18.3■□□□□ 0.52
SIX3-201ENST00000260653 VAMP2P63027 116 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 NHLH2Q02577 135 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 GPR157Q5UAW9 335 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 OR8B3Q8NGG8 313 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 OR8B2Q96RD0 313 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 S1PR3Q99500 378 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 PRELID3BQ9Y3B1 194 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 ZNF295-AS1Q8N0V1 137 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 C11orf42Q8N5U0 333 aa18.3■□□□□ 0.52
SIX3-201ENST00000260653 RBMXL1Q96E39 390 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms