RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MTORP42345 2549 aa12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 MDFIC2A0A1B0GVS7 189 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 OOSP1A8MZH6 123 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 RLN1P04808 185 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 SPNP16150 400 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 PIGPP57054 158 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 RPL30P62888 115 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 DEFB112Q30KQ8 113 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 ABCA11PQ4W5N1 156 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 GLDNQ6ZMI3 551 aaPredicted RBP12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 TMED4Q7Z7H5 227 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 CMTM1Q8IZ96 169 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 TMEM230Q96A57 120 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 SCGB3A2Q96PL1 93 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 C20orf85Q9H1P6 137 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 NUDT15Q9NV35 164 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 C14orf166Q9Y224 244 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
CCDC90B-201ENST00000260054 ARPC1BO15143 372 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 TXNL1O43396 289 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 RND3P61587 244 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 IFITM2Q01629 132 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 THOC7Q6I9Y2 204 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 CCBE1Q6UXH8 406 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 OR8H3Q8N146 312 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 ZNF383Q8NA42 475 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 HSD17B10Q99714 261 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 BEX2Q9BXY8 128 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 COPZ2Q9P299 210 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 ZFHX3Q15911 3703 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 NSD1Q96L73 2696 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 IGHV3-72A0A0B4J1Y9 119 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 TIMM23O14925 209 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 FBP1P09467 338 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 CCDC144NLQ6NUI1 221 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 ZNF66Q6ZN08 573 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 KCTD9Q7L273 389 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 MOB3BQ86TA1 216 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 TBC1D26Q86UD7 250 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 OR51H1Q8NH63 302 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 DDB2Q92466 427 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 CFHR4Q92496 578 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 ZNF48Q96MX3 618 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 MEGF9Q9H1U4 602 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 NUBP2Q9Y5Y2 271 aa12.73□□□□□ -0.37
CCDC90B-201ENST00000260054 MPPED1O15442 326 aa12.72□□□□□ -0.37
CCDC90B-201ENST00000260054 THBS3P49746 956 aa12.72□□□□□ -0.37
CCDC90B-201ENST00000260054 HABP2Q14520 560 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-201ENST00000260054 SLC7A5P1Q8MH63 180 aa12.72□□□□□ -0.37
CCDC90B-201ENST00000260054 OR5AN1Q8NGI8 311 aa12.72□□□□□ -0.37
CCDC90B-201ENST00000260054 TCTEX1D2Q8WW35 142 aa12.72□□□□□ -0.37
CCDC90B-201ENST00000260054 CAPSLQ8WWF8 208 aa12.72□□□□□ -0.37
CCDC90B-201ENST00000260054 FN1P02751 2386 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-201ENST00000260054 H0YJW9 148 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 CCNKO75909 580 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 AKR1C4P17516 323 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 ANXA7P20073 488 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 S100GP29377 79 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 RAB13P51153 203 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 BRWD1-AS2P59051 145 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 TUSC1Q2TAM9 212 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 OR2B11Q5JQS5 317 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 PLET1Q6UQ28 207 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 CCDC71LQ8N9Z2 235 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 ADTRPQ96IZ2 230 aa12.71□□□□□ -0.37
CCDC90B-201ENST00000260054 CRYM-AS1A6NIL9 109 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 TRAPPC2P0DI81 140 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 TRAPPC2BP0DI82 140 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 SRD5A1P18405 259 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 CD24P25063 80 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 F2RP25116 425 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 RAB25P57735 213 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 CATR1Q13166 79 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 FBLN7Q53RD9 439 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 SLC25A42Q86VD7 318 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 BEX1Q9HBH7 125 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 TEX13DA0A0J9YY54 714 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 H2AFB2P0C5Z0 115 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 SUPT4H1P63272 117 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 DHODHQ02127 395 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 TMEM128Q5BJH2 165 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 PIFOQ8TCI5 191 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 TP53RKQ96S44 253 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 MARVELD1Q9BSK0 173 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 PRDM13Q9H4Q3 707 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 NAA60Q9H7X0 242 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 SLC35D1Q9NTN3 355 aa12.7□□□□□ -0.38
CCDC90B-201ENST00000260054 C3orf85A0A1B0GTC6 90 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 FAM90A9PA6NNJ1 464 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 RNF212BA8MTL3 300 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 RAMP3O60896 148 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 FCGR3BO75015 233 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 VENTXO95231 258 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 IGKV1-16P04430 117 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 CD1BP29016 333 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 MECP2P51608 486 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 ARHGDIBP52566 201 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms