RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CBLN1P23435 193 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 NTF4P34130 210 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
TROAP-201ENST00000257909 DEFB119Q8N690 84 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 ZNF114Q8NC26 417 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 SGCZQ96LD1 299 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 OR6C1Q96RD1 312 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 TRBV9A0A0B4J1U6 114 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 TRAV24A0A0B4J272 114 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 IGHV1OR15-9A0A0B4J2B8 117 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 A0A1W2PR80 420 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 WDR1O75083 606 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 CTRLP40313 264 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 UBE2G2P60604 165 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 MMDQ15546 238 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 LEMD1Q68G75 181 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 C16orf54Q6UWD8 224 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 C1orf174Q8IYL3 243 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 OR1L1Q8NH94 360 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 C22orf15Q8WYQ4 148 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 CCDC74BQ96LY2 380 aa9.7□□□□□ -0.86
TROAP-201ENST00000257909 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.7□□□□□ -0.86
TROAP-201ENST00000257909 TNRC6BQ9UPQ9 1833 aaKnown RBP9.69□□□□□ -0.86
TROAP-201ENST00000257909 LRRC30A6NM36 301 aa9.69□□□□□ -0.86
TROAP-201ENST00000257909 DIRC3C9JPN6 131 aa9.69□□□□□ -0.86
TROAP-201ENST00000257909 ITGB1BP1O14713 200 aa9.69□□□□□ -0.86
TROAP-201ENST00000257909 SCRG1O75711 98 aa9.69□□□□□ -0.86
TROAP-201ENST00000257909 EN2P19622 333 aaPredicted RBP9.69□□□□□ -0.86
TROAP-201ENST00000257909 PTTG1IPP53801 180 aa9.69□□□□□ -0.86
TROAP-201ENST00000257909 KLF3P57682 345 aaPredicted RBP9.69□□□□□ -0.86
TROAP-201ENST00000257909 CCL7P80098 99 aa9.69□□□□□ -0.86
TROAP-201ENST00000257909 SPATA45Q537H7 98 aa9.69□□□□□ -0.86
TROAP-201ENST00000257909 MRPL21Q7Z2W9 205 aaKnown RBP9.69□□□□□ -0.86
TROAP-201ENST00000257909 QTRT1Q9BXR0 403 aaKnown RBP9.69□□□□□ -0.86
TROAP-201ENST00000257909 ZNF703Q9H7S9 590 aaPredicted RBP9.69□□□□□ -0.86
TROAP-201ENST00000257909 DLL3Q9NYJ7 618 aa9.69□□□□□ -0.86
TROAP-201ENST00000257909 TNRC6AQ8NDV7 1962 aaKnown RBP9.69□□□□□ -0.86
TROAP-201ENST00000257909 A0A1W2PPV4 95 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 PGPEP1LA6NFU8 196 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 ZNF716A6NP11 495 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 SYNGR1O43759 233 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 TRAPPC6AO75865 159 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 TIAF1O95411 115 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 GPX1P07203 203 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 RBX1P62877 108 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 DRAM1Q8N682 238 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 CPEB3Q8NE35 698 aaKnown RBP9.68□□□□□ -0.86
TROAP-201ENST00000257909 CLN8Q9UBY8 286 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 CEP192Q8TEP8 1941 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 FCN1O00602 326 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 OR5G3P0C626 314 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 CCL3P10147 92 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 CARD18P57730 90 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 KRTDAPP60985 99 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 RPL19P84098 196 aaKnown RBP9.68□□□□□ -0.86
TROAP-201ENST00000257909 NRN1LQ496H8 165 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 FAM58AQ8N1B3 248 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 APOBEC3DQ96AK3 386 aaPredicted RBP9.68□□□□□ -0.86
TROAP-201ENST00000257909 FBXL7Q9UJT9 491 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 LAMTOR2Q9Y2Q5 125 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 CEP290O15078 2479 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 CNTRLQ7Z7A1 2325 aa9.68□□□□□ -0.86
TROAP-201ENST00000257909 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 NKX6-3A6NJ46 265 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 CYC1P08574 325 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 NXPH1P58417 271 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 TRIP6Q15654 476 aaKnown RBP9.67□□□□□ -0.86
TROAP-201ENST00000257909 STPG4Q8N801 248 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 Q8N976 141 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 ZBTB34Q8NCN2 500 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 OR1L6Q8NGR2 347 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 OCC1Q8TAD7 63 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 STARD4Q96DR4 205 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 TXN2Q99757 166 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 ZNF552Q9H707 407 aaPredicted RBP9.67□□□□□ -0.86
TROAP-201ENST00000257909 ZNF407Q9C0G0 2248 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 A8MXE2 369 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 NDUFB8O95169 186 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 P0C879 139 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 DEFA4P12838 97 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 HNRNPA3P51991 378 aaKnown RBP9.67□□□□□ -0.86
TROAP-201ENST00000257909 KLHDC1Q8N7A1 406 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 KCNE4Q8WWG9 221 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 LRFN3Q9BTN0 628 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 GNB1LQ9BYB4 327 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 PROK2Q9HC23 129 aa9.67□□□□□ -0.86
TROAP-201ENST00000257909 SAA2-SAA4A0A096LPE2 208 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 ODAMA1E959 279 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 FAM166BA8MTA8 275 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 K7EP13 123 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 ZG16O60844 167 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 ZNF253O75346 499 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 IGLC2P0DOY2 106 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 LGALS4P56470 323 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 MLF1P58340 268 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 OR10J3Q5JRS4 329 aa9.66□□□□□ -0.86
TROAP-201ENST00000257909 Q6ZN92 141 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms