RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 IFNL4K9M1U5 179 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 RAMP3O60896 148 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 COX5AP20674 150 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 CDX1P47902 265 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 P2RY6Q15077 328 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 WDR25Q64LD2 544 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 FGFRL1Q8N441 504 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 OR2C3Q8N628 320 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 COMMD1Q8N668 190 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST1H2BKO60814 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 SCAF4O95104 1147 aaKnown RBP12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST1H2BJP06899 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST1H2BOP23527 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST1H2BBP33778 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 KLF3P57682 345 aaPredicted RBP12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST1H2BDP58876 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST1H2BCP62807 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 ELOBQ15370 118 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST2H2BEQ16778 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 ZNF324BQ6AW86 544 aaPredicted RBP12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 C11orf53Q8IXP5 236 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST1H2BHQ93079 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST1H2BNQ99877 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 HIST1H2BMQ99879 126 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 TMED3Q9Y3Q3 217 aa12.27□□□□□ -0.44
TRAFD1-201ENST00000257604 G6PCP35575 357 aa12.27□□□□□ -0.45
TRAFD1-201ENST00000257604 RPP30P78346 268 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-201ENST00000257604 IL13RA2Q14627 380 aa12.27□□□□□ -0.45
TRAFD1-201ENST00000257604 OR8G2PQ6IF36 304 aa12.27□□□□□ -0.45
TRAFD1-201ENST00000257604 ACP7Q6ZNF0 438 aa12.27□□□□□ -0.45
TRAFD1-201ENST00000257604 Q6ZRM9 215 aa12.27□□□□□ -0.45
TRAFD1-201ENST00000257604 SNRNP40Q96DI7 357 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-201ENST00000257604 ACACBO00763 2458 aa12.27□□□□□ -0.45
TRAFD1-201ENST00000257604 TMEM30CPA0ZSE6 113 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A10PA6NDY2 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A18PA6NE21 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A16PA6NEW6 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A20PA6NIJ5 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A8PA6NJQ4 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A7PA6NKC0 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A22PA8MWA6 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A12PA8MX19 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A5PA8MXJ8 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A23PA8MXZ1 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 PHOX2AO14813 284 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 CGAP01215 116 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A15PP0C7V4 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 METTL15P1P0C7V9 234 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A13PP0C7W8 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A14PP0C7W9 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 FAM90A24PP0C7X0 464 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 TESK1Q15569 626 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 SPANXN5Q5MJ07 72 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 SPSB3Q6PJ21 355 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 DOLPP1Q86YN1 238 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 GPR146Q96CH1 333 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 BOD1Q96IK1 185 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 STRAPQ9Y3F4 350 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 CTXN2P0C2S0 81 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 PRDX2P32119 198 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 DYNLT3P51808 116 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 SSTP61278 116 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 RPL23AP62750 156 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 PRB3Q04118 309 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 SMIM21Q3B7S5 101 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 GPR157Q5UAW9 335 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 ZNF497Q6ZNH5 498 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 DRAM1Q8N682 238 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 DECR2Q9NUI1 292 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 KHDC3LQ587J8 217 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 Q8IYB0 196 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 CD177Q8N6Q3 437 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 MALSU1Q96EH3 234 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 COQ2Q96H96 371 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 YPEL4Q96NS1 127 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 MRPL37Q9BZE1 423 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 RIMS4Q9H426 269 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 RAXQ9Y2V3 346 aa12.26□□□□□ -0.45
TRAFD1-201ENST00000257604 MBD3L4A6NDZ8 208 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 MBD3L3A6NE82 208 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 MBD3L5A6NJ08 208 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 KIAA1324LA8MWY0 1029 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 GATCO43716 136 aaKnown RBP12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 CEACAM4O75871 244 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 TMEM50AO95807 157 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 SELENOVP59797 346 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 NKX6-1P78426 367 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 H1FOOQ8IZA3 346 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 VKORC1L1Q8N0U8 176 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 MBD3L2Q8NHZ7 208 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 LURAP1Q96LR2 239 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 WSB1Q9Y6I7 421 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 A0A0G2JNJ9 132 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 ZNF705GA8MUZ8 300 aaPredicted RBP12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 UTF1Q5T230 341 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 THNSL2Q86YJ6 484 aa12.25□□□□□ -0.45
TRAFD1-201ENST00000257604 Q8NFD4 153 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms