RNA–Protein interactions for RNA: ENST00000256646.6

NOTCH2-201, Transcript of notch 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH2, Length 11,389 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-201ENST00000256646 TRPM3Q9HCF6 1732 aaPredicted RBP8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 SGMS2Q8NHU3 365 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 GMPPAQ96IJ6 420 aaPredicted RBP8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 KMT2EQ8IZD2 1858 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 J3QT63 122 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 NPFFO15130 113 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 ANOS1P23352 680 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 UCP2P55851 309 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 PSG4Q00888 419 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 DMKNQ6E0U4 476 aaPredicted RBP8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 MRPL30Q8TCC3 161 aaKnown RBP8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 GLMPQ8WWB7 406 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 CCL27Q9Y4X3 112 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 ACACAQ13085 2346 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 ATP5G2Q06055 141 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 TMEM177Q53S58 311 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 SH3BGRL3Q9H299 93 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 MIOXQ9UGB7 285 aa8.6□□□□□ -1.03
NOTCH2-201ENST00000256646 RPL27AP46776 148 aaKnown RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 ITLN2Q8WWU7 325 aaPredicted RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 XIRP1Q702N8 1843 aaKnown RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 WFDC12Q8WWY7 111 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 MIXL1Q9H2W2 232 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 ELF5Q9UKW6 265 aaPredicted RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 FOXI3A8MTJ6 420 aaPredicted RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 OR2H2O95918 312 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 GZMHP20718 246 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 MS4A5Q9H3V2 200 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 RBM11P57052 281 aaKnown RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 PLPPR5Q32ZL2 321 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 SLC22A18ASQ8N1D0 253 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 DEFB104AQ8WTQ1 72 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 FREM3P0C091 2139 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 SLC25A33Q9BSK2 321 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 AHDC1Q5TGY3 1603 aaPredicted RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 OGG1O15527 345 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 SNAI2O43623 268 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 TSPAN13O95857 204 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 DCAF12L2Q5VW00 463 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 SRSF12Q8WXF0 261 aaKnown RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 GPR82Q96P67 336 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 CTSBP07858 339 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 MMP16P51512 607 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 C18orf15Q96N68 181 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 SF3B6Q9Y3B4 125 aaKnown RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 PITX3O75364 302 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 CD99P14209 185 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 TMPRSS3P57727 454 aa8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 LSM10Q969L4 123 aaKnown RBP8.59□□□□□ -1.03
NOTCH2-201ENST00000256646 MOSP00540 346 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 PARLQ9H300 379 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 B4E171 279 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 ZNF658BQ4V348 819 aaPredicted RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 LILRA6Q6PI73 481 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 INO80CQ6PI98 192 aaPredicted RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 C11orf44Q8N8P7 122 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 TMEM160Q9NX00 188 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 TGIF2-C20orf24A0A0A6YYL0 155 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 TMEM218A2RU14 115 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 A0A0J9YW62 118 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 STAG3L2P0CL84 134 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 LSM6P62312 80 aaKnown RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 HIST1H1AQ02539 215 aaPredicted RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 BIVMQ86UB2 503 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 OR52M1Q8NGK5 317 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 FCARP24071 287 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 CXorf65A6NEN9 183 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 C21orf140B9A014 251 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 PGA4P0DJD7 388 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 PGA5P0DJD9 388 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 RND2P52198 227 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 NANOS3P60323 173 aaKnown RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 SUMO2P61956 95 aaKnown RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 CCDC144NLQ6NUI1 221 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 PRR19A6NJB7 356 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 RELQ04864 619 aaPredicted RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 BHLHA9Q7RTU4 235 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 FGF9P31371 208 aaPredicted RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 MESP2Q0VG99 397 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 NUDT10Q8NFP7 164 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 NUDT11Q96G61 164 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 LOC105371242A0A075B767 164 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 NAT1P18440 290 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 CXorf66Q5JRM2 361 aaPredicted RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 V9GYH0 126 aa8.58□□□□□ -1.04
NOTCH2-201ENST00000256646 TMEM210A6NLX4 147 aa8.57□□□□□ -1.04
NOTCH2-201ENST00000256646 PLP1P60201 277 aa8.57□□□□□ -1.04
NOTCH2-201ENST00000256646 SIGIRRQ6IA17 410 aa8.57□□□□□ -1.04
NOTCH2-201ENST00000256646 PNKDQ8N490 385 aa8.57□□□□□ -1.04
NOTCH2-201ENST00000256646 APCDD1LQ8NCL9 501 aa8.57□□□□□ -1.04
NOTCH2-201ENST00000256646 KCNK7Q9Y2U2 307 aa8.57□□□□□ -1.04
NOTCH2-201ENST00000256646 LOC101059948A0A1B0GTJ6 334 aa8.57□□□□□ -1.04
NOTCH2-201ENST00000256646 GRIFINA4D1Z8 144 aa8.57□□□□□ -1.04
NOTCH2-201ENST00000256646 RNASE4P34096 147 aaKnown RBP8.57□□□□□ -1.04
NOTCH2-201ENST00000256646 IBA57Q5T440 356 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms