RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 VHLLQ6RSH7 139 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 DNASE2BQ8WZ79 361 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 YPEL4Q96NS1 127 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 CDH20Q9HBT6 801 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 FKBP11Q9NYL4 201 aa10.12□□□□□ -0.79
USHBP1-201ENST00000252597 BOKQ9UMX3 212 aaPredicted RBP10.12□□□□□ -0.79
USHBP1-201ENST00000252597 LRP5LA4QPB2 252 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 C17orf98A8MV24 154 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 SLC17A3O00476 420 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 FCGR3BO75015 233 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 AGFG2O95081 481 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 NUBP1P53384 320 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 ZNF90Q03938 601 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 SLC10A1Q14973 349 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 LRRC75BQ2VPJ9 315 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 OR5A2Q8NGI9 324 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 KCNE4Q8WWG9 221 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 LEAP2Q969E1 77 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 TBX15Q96SF7 602 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 PCED1AQ9H1Q7 454 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 PLSCR2Q9NRY7 297 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 TCFL5Q9UL49 500 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 CBLN1P23435 193 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 CDC34P49427 236 aaPredicted RBP10.11□□□□□ -0.79
USHBP1-201ENST00000252597 B3GALT5-AS1P59052 145 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 UBE2NP61088 152 aaKnown RBP10.11□□□□□ -0.79
USHBP1-201ENST00000252597 RPL30P62888 115 aaKnown RBP10.11□□□□□ -0.79
USHBP1-201ENST00000252597 MSMO1Q15800 293 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 PRAMEF6Q5VXH4 476 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 MDP1Q86V88 176 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 DUSP13Q9UII6 198 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 SPTBN1Q01082 2364 aaKnown RBP10.11□□□□□ -0.79
USHBP1-201ENST00000252597 PLCE1Q9P212 2302 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 TNCP24821 2201 aa10.11□□□□□ -0.79
USHBP1-201ENST00000252597 MDFIC2A0A1B0GVS7 189 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 ODAMA1E959 279 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 AQP7O14520 342 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 LAMTOR5O43504 91 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 KBTBD11O94819 623 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 KITLGP21583 273 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 KRTDAPP60985 99 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 TNFRSF9Q07011 255 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 ZNF585BQ52M93 769 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 HES3Q5TGS1 186 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 ZNF295-AS1Q8N0V1 137 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 VN1R17PQ8TDU5 208 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 NEIL1Q96FI4 390 aaPredicted RBP10.1□□□□□ -0.79
USHBP1-201ENST00000252597 C1QTNF5Q9BXJ0 243 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 SRD5A3Q9H8P0 318 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 B4GALT7Q9UBV7 327 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 DCAF12Q5T6F0 453 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 PRAMEF5Q5TYX0 476 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 UBALD2Q8IYN6 164 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 PINX1Q96BK5 328 aaKnown RBP10.1□□□□□ -0.79
USHBP1-201ENST00000252597 GALMQ96C23 342 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 TOX3O15405 576 aaPredicted RBP10.1□□□□□ -0.79
USHBP1-201ENST00000252597 LMO1P25800 156 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 PPP1CBP62140 327 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 JOSD1Q15040 202 aaPredicted RBP10.1□□□□□ -0.79
USHBP1-201ENST00000252597 ZNF124Q15973 351 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 DPPA3Q6W0C5 159 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 TMEM105Q8N8V8 129 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 WDYHV1Q96HA8 205 aa10.1□□□□□ -0.79
USHBP1-201ENST00000252597 HRASP01112 189 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 TAS2R60P59551 318 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 ZFP36L1Q07352 338 aaKnown RBP10.09□□□□□ -0.79
USHBP1-201ENST00000252597 IL11RAQ14626 422 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 ATP1A1-AS1Q5TC04 95 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 ASCL4Q6XD76 172 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 SCCPDHQ8NBX0 429 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
USHBP1-201ENST00000252597 ZNF391Q9UJN7 358 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 COL6A6A6NMZ7 2263 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 CACNA1BQ00975 2339 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 LY6G6EA0A0G2JKS1 128 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 F6UZH7 168 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 DKK1O94907 266 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 FGF5P12034 268 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 GCH1P30793 250 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 CNN1P51911 297 aaKnown RBP10.09□□□□□ -0.79
USHBP1-201ENST00000252597 OR1C1Q15619 314 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 PPP1R32Q7Z5V6 425 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 ABHD12Q8N2K0 398 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 CT55Q8WUE5 264 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 PARD6AQ9NPB6 346 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 IL36GQ9NZH8 169 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 U3KQA8 63 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 A0A1B0GW64 132 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 SH2D1BO14796 132 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 CEACAM1P13688 526 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 NTF3P20783 257 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 SSTP61278 116 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 SERF2P84101 59 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 MIC13Q5XKP0 118 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 TEX38Q6PEX7 206 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 CYP2G1PQ6ZSU1 146 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 PRDM14Q9GZV8 571 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 C11orf1Q9H5F2 150 aa10.09□□□□□ -0.79
USHBP1-201ENST00000252597 MAP1AP78559 2803 aaPredicted RBP10.08□□□□□ -0.8
USHBP1-201ENST00000252597 TECTAO75443 2155 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms