RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PITPNAQ00169 270 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 TMEM267Q0VDI3 215 aaPredicted RBP7.9□□□□□ -1.14
VPS50-201ENST00000251739 RBM48Q5RL73 367 aaKnown RBP7.9□□□□□ -1.14
VPS50-201ENST00000251739 OGFRL1Q5TC84 451 aaPredicted RBP7.9□□□□□ -1.14
VPS50-201ENST00000251739 ZNF383Q8NA42 475 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 DRAXINQ8NBI3 349 aaPredicted RBP7.9□□□□□ -1.14
VPS50-201ENST00000251739 LFNGQ8NES3 379 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 BPIFB6Q8NFQ5 453 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 METTL1Q9UBP6 276 aaKnown RBP7.9□□□□□ -1.14
VPS50-201ENST00000251739 AK3Q9UIJ7 227 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 RNF150Q9ULK6 438 aa7.9□□□□□ -1.14
VPS50-201ENST00000251739 PLECQ15149 4684 aaKnown RBP7.89□□□□□ -1.15
VPS50-201ENST00000251739 H3BUA1 57 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 H7C2Y5 167 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 EBAG9O00559 213 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 SLC17A2O00624 439 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 SOCS1O15524 211 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 HSPA12AO43301 675 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 BRI3O95415 125 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 CA2P00918 260 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 IGLV2-23P01705 113 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 SRMP19623 302 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 ZBTB25P24278 435 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 TMEM50BP56557 158 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 LINC00205P59089 165 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 TPPP2P59282 170 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 IRF3Q14653 427 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 PLGLAQ15195 96 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 RCN1Q15293 331 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 HSD17B12Q53GQ0 312 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 UNQ5815/PRO19632Q6UWF5 114 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 HAPLN4Q86UW8 402 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 PDPNQ86YL7 162 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 POC5Q8NA72 575 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 FLYWCH2Q96CP2 140 aaKnown RBP7.89□□□□□ -1.15
VPS50-201ENST00000251739 THAP7Q9BT49 309 aaPredicted RBP7.89□□□□□ -1.15
VPS50-201ENST00000251739 TMED9Q9BVK6 235 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 MND1Q9BWT6 205 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 EDA2RQ9HAV5 297 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 CHMP1AQ9HD42 196 aaPredicted RBP7.89□□□□□ -1.15
VPS50-201ENST00000251739 Q9N2K0 584 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 C12orf4Q9NQ89 552 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 PLEKHJ1Q9NW61 149 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 MGAT4AQ9UM21 535 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 STUB1Q9UNE7 303 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 ALMS1Q8TCU4 4167 aa7.89□□□□□ -1.15
VPS50-201ENST00000251739 LCE6AA0A183 80 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 SHISA3A0PJX4 238 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 CRYGBP07316 175 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 SCTP09683 121 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 IGHV4-30-4P0DP06 118 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 CPEP16870 476 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 CEACAM6P40199 344 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 SPHARQ15513 63 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 PLAC9Q5JTB6 97 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 IL34Q6ZMJ4 242 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 TMEM91Q6ZNR0 172 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 CEACAM19Q7Z692 300 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.88□□□□□ -1.15
VPS50-201ENST00000251739 ABHD5Q8WTS1 349 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 MS4A10Q96PG2 267 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 OR4C12Q96R67 309 aa7.88□□□□□ -1.15
VPS50-201ENST00000251739 TSNAXQ99598 290 aaKnown RBP7.88□□□□□ -1.15
VPS50-201ENST00000251739 LDLRAD4O15165 306 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 SLC25A17O43808 307 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 TRGV3P03979 118 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 LYL1P12980 280 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 ZP3P21754 424 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 PJVKQ0ZLH3 352 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 TPBGQ13641 420 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 KLF5Q13887 457 aaPredicted RBP7.87□□□□□ -1.15
VPS50-201ENST00000251739 FXYD3Q14802 87 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 P2RY14Q15391 338 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 SRSF7Q16629 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS50-201ENST00000251739 MRGPRG-AS1Q2M3A8 158 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 GRPEL2Q8TAA5 225 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 SETD6Q8TBK2 473 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 C5orf30Q96GV9 206 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 ARHGAP5-AS1Q96IT6 56 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 CLCC1Q96S66 551 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 URM1Q9BTM9 101 aaKnown RBP7.87□□□□□ -1.15
VPS50-201ENST00000251739 CABLES2Q9BTV7 478 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 PECRQ9BY49 303 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 ZMAT4Q9H898 229 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 RDH8Q9NYR8 311 aa7.87□□□□□ -1.15
VPS50-201ENST00000251739 DIRAS3O95661 229 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 APOA2P02652 100 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 ARSBP15848 533 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 VEGFCP49767 419 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 RPS16P62249 146 aaKnown RBP7.86□□□□□ -1.15
VPS50-201ENST00000251739 MOGAT2Q3SYC2 334 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 ANKRD39Q53RE8 183 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 LIPKQ5VXJ0 399 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 ANAPC16Q96DE5 110 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 ELOVL1Q9BW60 279 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 RANGRFQ9HD47 186 aaPredicted RBP7.86□□□□□ -1.15
VPS50-201ENST00000251739 PRR13Q9NZ81 148 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 ZNF221Q9UK13 617 aa7.86□□□□□ -1.15
VPS50-201ENST00000251739 KCNK7Q9Y2U2 307 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms