RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 OR51B6Q9H340 312 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 DKK4Q9UBT3 224 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 PCNX1Q96RV3 2341 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 A6NJY4 79 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 HS3ST1O14792 307 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 CISD2Q8N5K1 135 aaKnown RBP14.3□□□□□ -0.12
FOXA1-201ENST00000250448 OR10A7Q8NGE5 316 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 OR5R1Q8NH85 324 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 SH3BGRL2Q9UJC5 107 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 SS18L1O75177 396 aaPredicted RBP14.3□□□□□ -0.12
FOXA1-201ENST00000250448 IGKV1-5P01602 117 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 IL2RGP31785 369 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 ELLP55199 621 aaPredicted RBP14.3□□□□□ -0.12
FOXA1-201ENST00000250448 FAM214BQ7L5A3 538 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 OR4X1Q8NH49 305 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 APOBEC3DQ96AK3 386 aaPredicted RBP14.3□□□□□ -0.12
FOXA1-201ENST00000250448 RBKSQ9H477 322 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 OR1A1Q9P1Q5 309 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 NAT8Q9UHE5 227 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 NBEAQ8NFP9 2946 aa14.3□□□□□ -0.12
FOXA1-201ENST00000250448 TRAV24A0A0B4J272 114 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 LRP5LA4QPB2 252 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 DEGS1O15121 323 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 KIR2DL2P43627 348 aaPredicted RBP14.29□□□□□ -0.12
FOXA1-201ENST00000250448 UNQ6494/PRO21346Q6UXR6 183 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 TMEM183AQ8IXX5 376 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 OR5A2Q8NGI9 324 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 HIST1H2AAQ96QV6 131 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 WDR61Q9GZS3 305 aaKnown RBP14.29□□□□□ -0.12
FOXA1-201ENST00000250448 ADIRFQ15847 76 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 NCR3LG1Q68D85 454 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 SEM1Q6ZVN7 128 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 IL1F10Q8WWZ1 152 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 PINX1Q96BK5 328 aaKnown RBP14.29□□□□□ -0.12
FOXA1-201ENST00000250448 SMIM7Q9BQ49 75 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 SRD5A3Q9H8P0 318 aa14.29□□□□□ -0.12
FOXA1-201ENST00000250448 NBASA2RRP1 2371 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 A0A087X0M5 115 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 A0A1B0GX30 115 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 SMPD2O60906 423 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 PRR30Q53SZ7 412 aaPredicted RBP14.28□□□□□ -0.12
FOXA1-201ENST00000250448 C16orf82Q7Z2V1 217 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 OR1K1Q8NGR3 316 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 AGMATQ9BSE5 352 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 PARD6GQ9BYG4 376 aaPredicted RBP14.28□□□□□ -0.12
FOXA1-201ENST00000250448 NCOR1P1Q9H4R4 102 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 ZNF737O75373 536 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 IGHV1-2P23083 117 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 CYP2G1PQ6ZSU1 146 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 OR4C12Q96R67 309 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 GAB2Q9UQC2 676 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 NPIPB11E5RHQ5 1161 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 IGLV2-14P01704 120 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 LHX4Q969G2 390 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 PPP1R3CQ9UQK1 317 aa14.28□□□□□ -0.12
FOXA1-201ENST00000250448 UBE2L5PA0A1B0GUS4 154 aa14.27□□□□□ -0.12
FOXA1-201ENST00000250448 CD55P08174 381 aa14.27□□□□□ -0.12
FOXA1-201ENST00000250448 MYPOPQ86VE0 399 aaPredicted RBP14.27□□□□□ -0.12
FOXA1-201ENST00000250448 FAM58AQ8N1B3 248 aa14.27□□□□□ -0.12
FOXA1-201ENST00000250448 Q8NA96 180 aa14.27□□□□□ -0.12
FOXA1-201ENST00000250448 TAF15Q92804 592 aaKnown RBP eCLIP14.27□□□□□ -0.12
FOXA1-201ENST00000250448 PYGO2Q9BRQ0 406 aa14.27□□□□□ -0.12
FOXA1-201ENST00000250448 C3orf80F5H4A9 247 aa14.27□□□□□ -0.13
FOXA1-201ENST00000250448 NGFP01138 241 aa14.27□□□□□ -0.13
FOXA1-201ENST00000250448 PFN1P07737 140 aaKnown RBP14.27□□□□□ -0.13
FOXA1-201ENST00000250448 PMS2P11Q13670 270 aa14.27□□□□□ -0.13
FOXA1-201ENST00000250448 SPANXN5Q5MJ07 72 aa14.27□□□□□ -0.13
FOXA1-201ENST00000250448 MDP1Q86V88 176 aa14.27□□□□□ -0.13
FOXA1-201ENST00000250448 OR5P3Q8WZ94 311 aa14.27□□□□□ -0.13
FOXA1-201ENST00000250448 BCL2L2Q92843 193 aaPredicted RBP14.27□□□□□ -0.13
FOXA1-201ENST00000250448 LIN7CQ9NUP9 197 aaKnown RBP14.27□□□□□ -0.13
FOXA1-201ENST00000250448 DVL1O14640 695 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 CELA3BP08861 270 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 ZNF16P17020 682 aaPredicted RBP14.26□□□□□ -0.13
FOXA1-201ENST00000250448 MEF2BQ02080 365 aaPredicted RBP14.26□□□□□ -0.13
FOXA1-201ENST00000250448 COL10A1Q03692 680 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 SLC38A11Q08AI6 406 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 JOSD1Q15040 202 aaPredicted RBP14.26□□□□□ -0.13
FOXA1-201ENST00000250448 TGIF2LXQ8IUE1 241 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 OR1P1Q8NH06 330 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 SLC39A9Q9NUM3 307 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 KCNS2Q9ULS6 477 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 RELNP78509 3460 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 C1QTNF9BB2RNN3 333 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 KBTBD11O94819 623 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 AMBPP02760 352 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 C1QTNF9P0C862 333 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 GUSBP1Q15486 140 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 TESK1Q15569 626 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 TMEM241Q24JQ0 296 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 ZNF585BQ52M93 769 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 NECAP1Q8NC96 275 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 LAMP3Q9UQV4 416 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 FAM215AQ9Y5M1 114 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 KIAA2026Q5HYC2 2103 aa14.26□□□□□ -0.13
FOXA1-201ENST00000250448 TRAV39A0A0B4J263 110 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 AHRRA9YTQ3 701 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.25□□□□□ -0.13
FOXA1-201ENST00000250448 PAX1P15863 534 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 ZNF573Q86YE8 665 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms