RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 MIC13Q5XKP0 118 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 ADAM11O75078 769 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 CTAG1AP78358 180 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 SCGB1D4Q6XE38 83 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 CNTRLQ7Z7A1 2325 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 A0A087WV48 116 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 PARLQ9H300 379 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 SLC25A10Q9UBX3 287 aaPredicted RBP17.04■□□□□ 0.32
SOX4-201ENST00000244745 OTOFQ9HC10 1997 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 HOXA5P20719 270 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 LINC00114Q6XXX2 140 aa17.04■□□□□ 0.32
SOX4-201ENST00000244745 OR2T8A6NH00 312 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 ORM1P02763 201 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 OR8B3Q8NGG8 313 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 OR8B2Q96RD0 313 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 OPN3Q9H1Y3 402 aaPredicted RBP17.03■□□□□ 0.32
SOX4-201ENST00000244745 ZG16O60844 167 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 CD3EP07766 207 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 OR4A8P0C604 315 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 PLP1P60201 277 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 ATOH7Q8N100 152 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 DMRTA1Q5VZB9 504 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 INSIG2Q9Y5U4 225 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 KNL1Q8NG31 2342 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 TMSB15BA0A087X1C1 80 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 M0QZ24 198 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 COX6A1P12074 109 aa17.03■□□□□ 0.32
SOX4-201ENST00000244745 J3KRW8 73 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 TNFRSF9Q07011 255 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 ZNF788Q6ZQV5 615 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 FAM222BQ8WU58 562 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 CCL13Q99616 98 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 F5P12259 2224 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 SCN10AQ9Y5Y9 1956 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 OTX1P32242 354 aaPredicted RBP17.02■□□□□ 0.32
SOX4-201ENST00000244745 ASCL5Q7RTU5 278 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 GBGT1Q8N5D6 347 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 SMIM8Q96KF7 97 aa17.02■□□□□ 0.32
SOX4-201ENST00000244745 STAG3L2P0CL84 134 aa17.02■□□□□ 0.31
SOX4-201ENST00000244745 FXYD3Q14802 87 aa17.02■□□□□ 0.31
SOX4-201ENST00000244745 CDX2Q99626 313 aaPredicted RBP17.02■□□□□ 0.31
SOX4-201ENST00000244745 RTBDNQ9BSG5 229 aaPredicted RBP17.02■□□□□ 0.31
SOX4-201ENST00000244745 C12orf54Q6X4T0 127 aa17.02■□□□□ 0.31
SOX4-201ENST00000244745 DOLPP1Q86YN1 238 aa17.02■□□□□ 0.31
SOX4-201ENST00000244745 OR10S1Q8NGN2 331 aa17.02■□□□□ 0.31
SOX4-201ENST00000244745 RAMP1O60894 148 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 PMS2CLQ68D20 193 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 RAB1BQ9H0U4 201 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 S1PR2O95136 353 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 ARL14EPLP0DKL9 152 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 FGF5P12034 268 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 CLDN18P56856 261 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 KBTBD11O94819 623 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 HLA-DQA1P01909 254 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 SRIP30626 198 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 BIVMQ86UB2 503 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 AP5S1Q9NUS5 200 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 HIGD1AQ9Y241 93 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 B4E171 279 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 K7N7A8 449 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 TSPAN7P41732 249 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 PQLC2Q6ZP29 291 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 MUC15Q8N387 334 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 ZDHHC16Q969W1 377 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 RALYQ9UKM9 306 aaKnown RBP17.01■□□□□ 0.31
SOX4-201ENST00000244745 HS3ST3B1Q9Y662 390 aa17.01■□□□□ 0.31
SOX4-201ENST00000244745 TIAF1O95411 115 aa17■□□□□ 0.31
SOX4-201ENST00000244745 SAXO1Q8IYX7 474 aa17■□□□□ 0.31
SOX4-201ENST00000244745 MRPL37Q9BZE1 423 aaKnown RBP17■□□□□ 0.31
SOX4-201ENST00000244745 CEACAM18A8MTB9 384 aa17■□□□□ 0.31
SOX4-201ENST00000244745 UCP3P55916 312 aa17■□□□□ 0.31
SOX4-201ENST00000244745 STXBP6Q8NFX7 210 aa17■□□□□ 0.31
SOX4-201ENST00000244745 Q8WTZ3 238 aa17■□□□□ 0.31
SOX4-201ENST00000244745 PKIBQ9C010 78 aa17■□□□□ 0.31
SOX4-201ENST00000244745 PRDM14Q9GZV8 571 aa17■□□□□ 0.31
SOX4-201ENST00000244745 MGST3O14880 152 aa17■□□□□ 0.31
SOX4-201ENST00000244745 MPDU1O75352 247 aa17■□□□□ 0.31
SOX4-201ENST00000244745 FABP2P12104 132 aa17■□□□□ 0.31
SOX4-201ENST00000244745 PCOLCEQ15113 449 aa17■□□□□ 0.31
SOX4-201ENST00000244745 SFRP2Q96HF1 295 aa17■□□□□ 0.31
SOX4-201ENST00000244745 SCN2AQ99250 2005 aa16.99■□□□□ 0.31
SOX4-201ENST00000244745 J3QRE1 110 aa16.99■□□□□ 0.31
SOX4-201ENST00000244745 LGALS7P47929 136 aa16.99■□□□□ 0.31
SOX4-201ENST00000244745 RELBQ01201 579 aa16.99■□□□□ 0.31
SOX4-201ENST00000244745 KIAA1644Q3SXP7 199 aa16.99■□□□□ 0.31
SOX4-201ENST00000244745 QTRT1Q9BXR0 403 aaKnown RBP16.99■□□□□ 0.31
SOX4-201ENST00000244745 RPL31P62899 125 aaKnown RBP16.99■□□□□ 0.31
SOX4-201ENST00000244745 ZNF658BQ4V348 819 aaPredicted RBP16.99■□□□□ 0.31
SOX4-201ENST00000244745 C10orf128Q5T292 105 aa16.99■□□□□ 0.31
SOX4-201ENST00000244745 SRSF9Q13242 221 aaKnown RBP eCLIP16.99■□□□□ 0.31
SOX4-201ENST00000244745 RAB1CQ92928 201 aa16.99■□□□□ 0.31
SOX4-201ENST00000244745 RAB37Q96AX2 223 aa16.99■□□□□ 0.31
SOX4-201ENST00000244745 MYOFQ9NZM1 2061 aa16.99■□□□□ 0.31
SOX4-201ENST00000244745 M0R296 226 aa16.98■□□□□ 0.31
SOX4-201ENST00000244745 UBE2CO00762 179 aa16.98■□□□□ 0.31
SOX4-201ENST00000244745 SRP19P09132 144 aaKnown RBP16.98■□□□□ 0.31
SOX4-201ENST00000244745 SLC25A34Q6PIV7 304 aa16.98■□□□□ 0.31
SOX4-201ENST00000244745 GRAMD2BQ96HH9 432 aa16.98■□□□□ 0.31
SOX4-201ENST00000244745 MTCL1Q9Y4B5 1905 aaKnown RBP16.98■□□□□ 0.31
SOX4-201ENST00000244745 LSM10Q969L4 123 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms