RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 TMEM128Q5BJH2 165 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 OR2B11Q5JQS5 317 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 FAM120AOSQ5T036 256 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 ZNF66Q6ZN08 573 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 IL17RELQ6ZVW7 336 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 SGPP2Q8IWX5 399 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 ZNF383Q8NA42 475 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 OR52B4Q8NGK2 314 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 NANPQ8TBE9 248 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 TCTEX1D2Q8WW35 142 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 RBMXL1Q96E39 390 aaKnown RBP9.28□□□□□ -0.92
TREM1-201ENST00000244709 NABP2Q9BQ15 211 aa9.28□□□□□ -0.92
TREM1-201ENST00000244709 A0A0U1RQK1 487 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 C3orf85A0A1B0GTC6 90 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 A0A1W2PPI3 338 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 RNF212BA8MTL3 300 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 SFT2D2O95562 160 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 DHFRP00374 187 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 HLA-AP01891 365 aaKnown RBP9.27□□□□□ -0.93
TREM1-201ENST00000244709 GAPDHP04406 335 aaKnown RBP9.27□□□□□ -0.93
TREM1-201ENST00000244709 OR5AC1P0C628 307 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 FOSL1P15407 271 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 VAMP1P23763 118 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 F2RP25116 425 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 THBS3P49746 956 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 CATR1Q13166 79 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 DHRS2Q13268 280 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 SLC9A3R2Q15599 337 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 TATDN3Q17R31 274 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 SP6Q3SY56 376 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 DDB2Q92466 427 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 MALSU1Q96EH3 234 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 TP53RKQ96S44 253 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 ALX4Q9H161 411 aaPredicted RBP9.27□□□□□ -0.93
TREM1-201ENST00000244709 LIN7CQ9NUP9 197 aaKnown RBP9.27□□□□□ -0.93
TREM1-201ENST00000244709 PRR13Q9NZ81 148 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 NUP50Q9UKX7 468 aa9.27□□□□□ -0.93
TREM1-201ENST00000244709 SONP18583 2426 aaKnown RBP9.27□□□□□ -0.93
TREM1-201ENST00000244709 IGHV3-72A0A0B4J1Y9 119 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 C9orf170A2RU37 121 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 H0Y980 276 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 H0YJW9 148 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 TXNL1O43396 289 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 IL5P05113 134 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 BRWD1-AS2P59051 145 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 LYG2Q86SG7 212 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 MOB3BQ86TA1 216 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 CASTOR1Q8WTX7 329 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 GALNT14Q96FL9 552 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 ADTRPQ96IZ2 230 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 HIVEP1P15822 2718 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 OOSP1A8MZH6 123 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 TIMM23O14925 209 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 PRAF2O60831 178 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 RAMP3O60896 148 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 FCGR3BO75015 233 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 IFNA2P01563 188 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 BPIFB3P59826 476 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 CCDC144NLQ6NUI1 221 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 CLEC9AQ6UXN8 241 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 Q6ZNX1 250 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 SPAG16Q8N0X2 631 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 BCL6BQ8N143 479 aaPredicted RBP9.26□□□□□ -0.93
TREM1-201ENST00000244709 OR8H3Q8N146 312 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 OR5AN1Q8NGI8 311 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 C22orf15Q8WYQ4 148 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 MS4A7Q9GZW8 240 aaPredicted RBP9.26□□□□□ -0.93
TREM1-201ENST00000244709 GSX1Q9H4S2 264 aaPredicted RBP9.26□□□□□ -0.93
TREM1-201ENST00000244709 SLC35D1Q9NTN3 355 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 KCNIP3Q9Y2W7 256 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 ALG5Q9Y673 324 aa9.26□□□□□ -0.93
TREM1-201ENST00000244709 A0A0A6YYJ9 748 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 APOA2P02652 100 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 ANXA3P12429 323 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 CBX3Q13185 183 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 TMEM187Q14656 261 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 ANKRD55Q3KP44 614 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 Q71RC1 249 aaPredicted RBP9.25□□□□□ -0.93
TREM1-201ENST00000244709 TEX29Q8N6K0 151 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 ZNF431Q8TF32 576 aaPredicted RBP9.25□□□□□ -0.93
TREM1-201ENST00000244709 GLYATL2Q8WU03 294 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 CFHR4Q92496 578 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 PRELID3BQ9Y3B1 194 aa9.25□□□□□ -0.93
TREM1-201ENST00000244709 MDFIC2A0A1B0GVS7 189 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 C7orf66A4D0T2 115 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 H7C2Y5 167 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 IGKV1-16P04430 117 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 UCP1P25874 307 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 SRP14P37108 136 aaKnown RBP9.24□□□□□ -0.93
TREM1-201ENST00000244709 KIR2DS2P43631 304 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 RTL8BQ17RB0 113 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 ZNF585BQ52M93 769 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 LIN54Q6MZP7 749 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 C11orf88Q6PI97 169 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 C9orf139Q6ZV77 190 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 LHFPL5Q8TAF8 219 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 TMEM222Q9H0R3 208 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 GPN1Q9HCN4 374 aaPredicted RBP9.24□□□□□ -0.93
TREM1-201ENST00000244709 TMEM160Q9NX00 188 aa9.24□□□□□ -0.93
TREM1-201ENST00000244709 WASHC3Q9Y3C0 194 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms