RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 IL3RAP26951 378 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 UBE2L3P68036 154 aaKnown RBP6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 RTP5Q14D33 572 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 TMEM108Q6UXF1 575 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 SGMS2Q8NHU3 365 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 WBP1Q96G27 269 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 HARBI1Q96MB7 349 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 A0A087X0M5 115 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 A0A1B0GX30 115 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 LRRC3CA6NJW4 275 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 C9orf172C9J069 976 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 CA11O75493 328 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 CD55P08174 381 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 WNT5AP41221 380 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 TNFRSF9Q07011 255 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 DHRS7BQ6IAN0 325 aaPredicted RBP6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 OR5P3Q8WZ94 311 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 RCC1LQ96I51 464 aaKnown RBP6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 SMIM8Q96KF7 97 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 MEGF10Q96KG7 1140 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 SAP30LQ9HAJ7 183 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 ZNF586Q9NXT0 402 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 DUXBA0A1W2PPF3 345 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 C12orf77C9JDV5 145 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 RBP4P02753 201 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 LRRC10Q5BKY1 277 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 LHFPL1Q86WI0 220 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 SGK494Q96LW2 274 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 GNB4Q9HAV0 340 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 WFDC1Q9HC57 220 aa6.3□□□□□ -1.4
NEUROD4-201ENST00000242994 J3QR06 171 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 RRP8O43159 456 aaKnown RBP6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 FTH1P19P0C7X4 201 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 CCL1P22362 96 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 MPV17P39210 176 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 AMTP48728 403 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 SUMO1P63165 101 aaKnown RBP6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 PSG7Q13046 419 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 ATP6V1FQ16864 119 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 OR10G8Q8NGN5 311 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 FAM117AQ9C073 453 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 SRD5A3Q9H8P0 318 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 CYTL1Q9NRR1 136 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 FBLN5Q9UBX5 448 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 CARHSP1Q9Y2V2 147 aaKnown RBP6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 NOTCH2Q04721 2471 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 PTPRQQ9UMZ3 2332 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 LOC102723996A0A087X1L8 192 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 hADV38S2A0JD32 116 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 ODAMA1E959 279 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 CHEK1O14757 476 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 LILRA1O75019 489 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 CYC1P08574 325 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 UCP1P25874 307 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 IER3P46695 156 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 CNN1P51911 297 aaKnown RBP6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 RPL31P62899 125 aaKnown RBP6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 QRFPP83859 136 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 SERF2P84101 59 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 CSRP2Q16527 193 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 RPL39P5Q59GN2 51 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 GGNQ86UU5 652 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 EIF4E3Q8N5X7 224 aaKnown RBP6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 PLPPR1Q8TBJ4 325 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 HS3ST6Q96QI5 342 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 C1QTNF5Q9BXJ0 243 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 SH2D2AQ9NP31 389 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 FOXD3Q9UJU5 478 aaPredicted RBP6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 TGOLN2O43493 480 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 NEURL1O76050 574 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 CRYABP02511 175 aaKnown RBP6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 CRYGSP22914 178 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 RAB7AP51149 207 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 UCP3P55916 312 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 RPL11P62913 178 aaKnown RBP6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 FAM209BQ5JX69 171 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 IER2Q9BTL4 223 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 ONECUT1Q9UBC0 465 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 PXMP4Q9Y6I8 212 aa6.29□□□□□ -1.4
NEUROD4-201ENST00000242994 COL4A3Q01955 1670 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 ARHGAP21Q5T5U3 1957 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 C17orf98A8MV24 154 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 CYB5R3P00387 301 aaPredicted RBP6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 SLC25A5P05141 298 aaKnown RBP6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 TRGC1P0CF51 173 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 CRISP2P16562 243 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 ADCYAP1P18509 176 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 LHX2P50458 406 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 BPIFB3P59826 476 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 TNXAQ16473 311 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 TRAT1Q6PIZ9 186 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 TGIF2LXQ8IUE1 241 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 KDF1Q8NAX2 398 aaPredicted RBP6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 OR8G5Q8NG78 346 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 RNF7Q9UBF6 113 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 C2orf16Q68DN1 1984 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 IGLV3-32A0A0A0MS00 114 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 SERTM2A0A1B0GWG4 89 aa6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 NCBP2LA6PVI3 153 aaKnown RBP6.28□□□□□ -1.4
NEUROD4-201ENST00000242994 SNURFLB1AK76 121 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms