RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 FHITP49789 147 aa14.02□□□□□ -0.16
GAPDH-201ENST00000229239 HOXA4Q00056 320 aaPredicted RBP14.02□□□□□ -0.16
GAPDH-201ENST00000229239 IZUMO4Q1ZYL8 232 aa14.02□□□□□ -0.16
GAPDH-201ENST00000229239 FAM74A3Q4VXF1 159 aa14.02□□□□□ -0.16
GAPDH-201ENST00000229239 ZNF808Q8N4W9 903 aaPredicted RBP14.02□□□□□ -0.16
GAPDH-201ENST00000229239 TPRX1Q8N7U7 411 aa14.02□□□□□ -0.16
GAPDH-201ENST00000229239 SDSLQ96GA7 329 aa14.02□□□□□ -0.16
GAPDH-201ENST00000229239 SLC35B3Q9H1N7 401 aa14.02□□□□□ -0.16
GAPDH-201ENST00000229239 JKAMPQ9P055 326 aa14.02□□□□□ -0.16
GAPDH-201ENST00000229239 VSTM5A8MXK1 200 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 RBFOX2O43251 390 aaKnown RBP eCLIP14.01□□□□□ -0.179e-10■□□□□ 10.4
GAPDH-201ENST00000229239 KIR2DS2P43631 304 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 RAB7AP51149 207 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 TNFAIP6P98066 277 aaPredicted RBP14.01□□□□□ -0.17
GAPDH-201ENST00000229239 GFRALQ6UXV0 394 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 RAMP3O60896 148 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 IGHV1-46P01743 117 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 CCKARP32238 428 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 GPR12P47775 334 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 MORN2Q502X0 79 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 TMEM14EPQ6UXP3 125 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 H2BFWTQ7Z2G1 175 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 PINX1Q96BK5 328 aaKnown RBP14.01□□□□□ -0.17
GAPDH-201ENST00000229239 KCNJ16Q9NPI9 418 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 GNG12Q9UBI6 72 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 PSG11Q9UQ72 335 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 HIVEP3Q5T1R4 2406 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 KIAA2026Q5HYC2 2103 aa14.01□□□□□ -0.17
GAPDH-201ENST00000229239 C9JQL5 133 aa14□□□□□ -0.17
GAPDH-201ENST00000229239 NUPL2O15504 423 aaKnown RBP14□□□□□ -0.17
GAPDH-201ENST00000229239 IAPPP10997 89 aa14□□□□□ -0.17
GAPDH-201ENST00000229239 PAX6P26367 422 aa14□□□□□ -0.17
GAPDH-201ENST00000229239 PPT1P50897 306 aa14□□□□□ -0.17
GAPDH-201ENST00000229239 SRSF1Q07955 248 aaKnown RBP eCLIP14□□□□□ -0.17
GAPDH-201ENST00000229239 TMEM267Q0VDI3 215 aaPredicted RBP14□□□□□ -0.17
GAPDH-201ENST00000229239 ZNF525Q8N782 197 aa14□□□□□ -0.17
GAPDH-201ENST00000229239 ZNF436-AS1Q8NC38 126 aaPredicted RBP14□□□□□ -0.17
GAPDH-201ENST00000229239 RFESDQ8TAC1 157 aa14□□□□□ -0.17
GAPDH-201ENST00000229239 GCM1Q9NP62 436 aa14□□□□□ -0.17
GAPDH-201ENST00000229239 TIMM9Q9Y5J7 89 aa14□□□□□ -0.17
GAPDH-201ENST00000229239 USP9YO00507 2555 aaPredicted RBP14□□□□□ -0.17
GAPDH-201ENST00000229239 SVILO95425 2214 aa14□□□□□ -0.17
GAPDH-201ENST00000229239 CHD3Q12873 2000 aaKnown RBP14□□□□□ -0.17
GAPDH-201ENST00000229239 C17orf98A8MV24 154 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 H3BP45 60 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 PPIHO43447 177 aaKnown RBP13.99□□□□□ -0.17
GAPDH-201ENST00000229239 S1PR2O95136 353 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 KRASP01116 189 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 IRF2P14316 349 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 G6PCP35575 357 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 RBPJQ06330 500 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 LRRC75BQ2VPJ9 315 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 Q3ZCU0 254 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 STUMQ69YW2 141 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 LILRB2Q8N423 598 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 RBKSQ9H477 322 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 IGHV3-43A0A0B4J1X8 118 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 H7C2Y5 167 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 ST8SIA5O15466 376 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 HPRT1P00492 218 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 CD55P08174 381 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 CGB3P0DN86 165 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 CGB7P0DN87 165 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 IGHV3-43DP0DP04 118 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 TNFRSF1AP19438 455 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 BRWD1-AS2P59051 145 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 ZNF816Q0VGE8 651 aaPredicted RBP13.99□□□□□ -0.17
GAPDH-201ENST00000229239 SPTAN1Q13813 2472 aaKnown RBP13.99□□□□□ -0.17
GAPDH-201ENST00000229239 AARDQ4LEZ3 155 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 SP5Q6BEB4 398 aaPredicted RBP13.99□□□□□ -0.17
GAPDH-201ENST00000229239 THNSL2Q86YJ6 484 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 ST6GALNAC3Q8NDV1 305 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 SMCO4Q9NRQ5 59 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 PRELID3BQ9Y3B1 194 aa13.99□□□□□ -0.17
GAPDH-201ENST00000229239 IGHV3OR15-7A0A075B7D8 119 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 RBFOX3A6NFN3 312 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 METTL15P1P0C7V9 234 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 DUTP33316 252 aaKnown RBP13.98□□□□□ -0.17
GAPDH-201ENST00000229239 NPBWR1P48145 328 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 LOXL3P58215 753 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 SPRNQ5BIV9 151 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 SPANXN5Q5MJ07 72 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 DCTN5Q9BTE1 182 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 NGBQ9NPG2 151 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 CALYQ9NYX4 217 aa13.98□□□□□ -0.17
GAPDH-201ENST00000229239 TRGV10A0A0A0MS01 117 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 RUNX1Q01196 453 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 TEX36Q5VZQ5 186 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 FAM53AQ6NSI3 398 aaPredicted RBP13.97□□□□□ -0.17
GAPDH-201ENST00000229239 FAM122CQ6P4D5 195 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 SPSB3Q6PJ21 355 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 BTNL3Q6UXE8 466 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 ZNRF1Q8ND25 227 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 ESRP2Q9H6T0 727 aaKnown RBP13.97□□□□□ -0.17
GAPDH-201ENST00000229239 ZNF665Q9H7R5 613 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 TUBA4BQ9H853 241 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 LINC00574Q9H8X3 128 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 LINC00473A8K010 186 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 SOX15O60248 233 aa13.97□□□□□ -0.17
GAPDH-201ENST00000229239 HSPB1P04792 205 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms