RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 LURAP1Q96LR2 239 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 NOL4LQ96MY1 436 aaPredicted RBP10.41□□□□□ -0.74
NUP88-201ENST00000225696 SNHG12Q9BXW3 62 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 OR2D2Q9H210 308 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 C12orf49Q9H741 205 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 TIMM9Q9Y5J7 89 aa10.41□□□□□ -0.74
NUP88-201ENST00000225696 TRAV38-1A0A0B4J264 116 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 C19orf67A6NJJ6 358 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 OR5B21A6NL26 309 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 LRRC30A6NM36 301 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 C11orf94C9JXX5 98 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 TCAPO15273 167 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 NEURL1O76050 574 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 GCGP01275 180 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 CELA3BP08861 270 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 C1QTNF9P0C862 333 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 COX5BP10606 129 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 GNB1P62873 340 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 TCF23Q7RTU1 214 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 ACY3Q96HD9 319 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 TMEM204Q9BSN7 226 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 ZNF703Q9H7S9 590 aaPredicted RBP10.4□□□□□ -0.74
NUP88-201ENST00000225696 CBLN4Q9NTU7 201 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 MBNL3Q9NUK0 354 aaKnown RBP10.4□□□□□ -0.74
NUP88-201ENST00000225696 MPC1Q9Y5U8 109 aa10.4□□□□□ -0.74
NUP88-201ENST00000225696 TNRC18O15417 2968 aaPredicted RBP10.4□□□□□ -0.75
NUP88-201ENST00000225696 J3QT63 122 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 FOSL1P15407 271 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 GCH1P30793 250 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 RPL15P61313 204 aaKnown RBP10.39□□□□□ -0.75
NUP88-201ENST00000225696 ERVK11-1P61568 191 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 LINC01551Q86U37 167 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 GBGT1Q8N5D6 347 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 OR2M7Q8NG81 312 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 APH1AQ96BI3 265 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 NEIL1Q96FI4 390 aaPredicted RBP10.39□□□□□ -0.75
NUP88-201ENST00000225696 TMEM147Q9BVK8 224 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 TRIOBPQ9H2D6 2365 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 TRBV20OR9-2A0A075B6H5 130 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 RBFOX2O43251 390 aaKnown RBP eCLIP10.39□□□□□ -0.75
NUP88-201ENST00000225696 NDUFB4O95168 129 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 OR3A1P47881 315 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 CASP6P55212 293 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 SPCS3P61009 180 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 NUTF2P61970 127 aaKnown RBP10.39□□□□□ -0.75
NUP88-201ENST00000225696 EIF4EBP1Q13541 118 aaPredicted RBP10.39□□□□□ -0.75
NUP88-201ENST00000225696 Q6ZR03 302 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 MAFAQ8NHW3 353 aaPredicted RBP10.39□□□□□ -0.75
NUP88-201ENST00000225696 DTD1Q8TEA8 209 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 MRPL37Q9BZE1 423 aaKnown RBP10.39□□□□□ -0.75
NUP88-201ENST00000225696 PKIBQ9C010 78 aa10.39□□□□□ -0.75
NUP88-201ENST00000225696 MRPS18CQ9Y3D5 142 aaKnown RBP10.39□□□□□ -0.75
NUP88-201ENST00000225696 LRP5LA4QPB2 252 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 C12orf77C9JDV5 145 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 FAM90A26D6RGX4 464 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 WNT9BO14905 357 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 MLNRO43193 412 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 SOX15O60248 233 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 TYMSP04818 313 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 ARR3P36575 388 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 CNN1P51911 297 aaKnown RBP10.38□□□□□ -0.75
NUP88-201ENST00000225696 PLP2Q04941 152 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 CYB5R2Q6BCY4 276 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 MDP1Q86V88 176 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 CXorf67Q86X51 503 aaPredicted RBP10.38□□□□□ -0.75
NUP88-201ENST00000225696 TPRX1Q8N7U7 411 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 TMEM105Q8N8V8 129 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 BEND2Q8NDZ0 799 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 OR10P1Q8NGE3 313 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 CT55Q8WUE5 264 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 TMEM18Q96B42 140 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 ANAPC16Q96DE5 110 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 GP6Q9HCN6 339 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 POLR3KQ9Y2Y1 108 aaPredicted RBP10.38□□□□□ -0.75
NUP88-201ENST00000225696 BOD1L1Q8NFC6 3051 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 A0A0U1RQK1 487 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 ZNF320A2RRD8 509 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 LINC00473A8K010 186 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 NXPH2O95156 264 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 SCGB1D1O95968 90 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 COX5AP20674 150 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 HNF1AP20823 631 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 G0S2P27469 103 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 AESQ08117 197 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 TDRG1Q3Y452 100 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 PMS2CLQ68D20 193 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 FIP1L1Q6UN15 594 aaKnown RBP10.38□□□□□ -0.75
NUP88-201ENST00000225696 ZNF826PQ6ZT77 177 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 CISD2Q8N5K1 135 aaKnown RBP10.38□□□□□ -0.75
NUP88-201ENST00000225696 ZNF645Q8N7E2 425 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 OR2J1Q9GZK6 312 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 MANBALQ9NQG1 85 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 WIPI2Q9Y4P8 454 aa10.38□□□□□ -0.75
NUP88-201ENST00000225696 IGHV3-43A0A0B4J1X8 118 aa10.37□□□□□ -0.75
NUP88-201ENST00000225696 GRIFINA4D1Z8 144 aa10.37□□□□□ -0.75
NUP88-201ENST00000225696 DEFB108AA8MXU0 73 aa10.37□□□□□ -0.75
NUP88-201ENST00000225696 GRPP07492 148 aa10.37□□□□□ -0.75
NUP88-201ENST00000225696 IGHV3-43DP0DP04 118 aa10.37□□□□□ -0.75
NUP88-201ENST00000225696 LBHQ53QV2 105 aaPredicted RBP10.37□□□□□ -0.75
NUP88-201ENST00000225696 CST9LP1Q5W188 147 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms