RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TSPO2Q5TGU0 170 aa3.82□□□□□ -1.8
CHD9-201ENST00000219084 DCAF12L2Q5VW00 463 aa3.82□□□□□ -1.8
CHD9-201ENST00000219084 C10orf111Q8N326 155 aa3.82□□□□□ -1.8
CHD9-201ENST00000219084 C1orf162Q8NEQ5 155 aaPredicted RBP3.82□□□□□ -1.8
CHD9-201ENST00000219084 CT55Q8WUE5 264 aa3.82□□□□□ -1.8
CHD9-201ENST00000219084 ZNF714Q96N38 554 aa3.82□□□□□ -1.8
CHD9-201ENST00000219084 GPR82Q96P67 336 aa3.82□□□□□ -1.8
CHD9-201ENST00000219084 CEP290O15078 2479 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 AHRRA9YTQ3 701 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 EML2O95834 649 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 LIPFP07098 398 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 EFNB2P52799 333 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 RPL8P62917 257 aaKnown RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 GAB4Q2WGN9 574 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 TCF23Q7RTU1 214 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 OR4C13Q8NGP0 309 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 VN1R17PQ8TDU5 208 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 RND1Q92730 232 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 SOSTQ9BQB4 213 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 IGHV1-45A0A0A0MS14 117 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 F8VVB4 439 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 F8VWA3 439 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 BMPR1BO00238 502 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 CDX4O14627 284 aaPredicted RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 CA2P00918 260 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 KIR2DL2P43627 348 aaPredicted RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 GNB2P62879 340 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 GUSBP11Q6P575 273 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 TMEM252Q8N6L7 170 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 ISOC2Q96AB3 205 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 GPA33Q99795 319 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 R3HDMLQ9H3Y0 253 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 MAP1LC3AQ9H492 121 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 AP5S1Q9NUS5 200 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 WBP1LQ9NX94 342 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 CACNA1BQ00975 2339 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 CEACAM18A8MTB9 384 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 ORM2P19652 201 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 PSMB2P49721 201 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 CAMPP49913 170 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 METTL26Q96S19 204 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 MRPL18Q9H0U6 180 aaKnown RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 MARCH11A6NNE9 402 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 FOXS1O43638 330 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 MPZL1O95297 269 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 MT-CO3P00414 261 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 LYPD8Q6UX82 237 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 LINC00114Q6XXX2 140 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 TMEM136Q6ZRR5 245 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 TRMT61AQ96FX7 289 aaKnown RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 KCNS1Q96KK3 526 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 SLC25A10Q9UBX3 287 aaPredicted RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 KLHDC2Q9Y2U9 406 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 PAM16Q9Y3D7 125 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 SHANK1Q9Y566 2161 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 GAGE10A6NGK3 116 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 IGFBP6P24592 240 aaPredicted RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 CTSSP25774 331 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 MAS1LP35410 378 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 ZNF83P51522 516 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 UCNP55089 124 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 HBBP68871 147 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 TNXAQ16473 311 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 CACNG8Q8WXS5 425 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 CLEC5AQ9NY25 188 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 LHFPL6Q9Y693 200 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 NUP210LQ5VU65 1888 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 TRAV1-1A0A0B4J248 108 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 A0A1B0GTI1 187 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 UBE2CO00762 179 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 TMPRSS2O15393 492 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 NDUFS6O75380 124 aaKnown RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 IGKV1D-16P01601 117 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 SRSF9Q13242 221 aaKnown RBP eCLIP3.81□□□□□ -1.8
CHD9-201ENST00000219084 SAPCD1Q5SSQ6 148 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 SMRP1Q8NCR6 262 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 FAM131CQ96AQ9 280 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 SDHCQ99643 169 aaPredicted RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 DNAJC4Q9NNZ3 241 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 INSIG2Q9Y5U4 225 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 A0A1B0GTH9 108 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 A0A1B0GV72 72 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 OR2W5A6NFC9 320 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 C5orf52A6NGY3 159 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 PRR33A8MZF0 331 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 PGLYRP1O75594 196 aaPredicted RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 GCM2O75603 506 aaPredicted RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 OR2J3O76001 311 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 LEPROTL1O95214 131 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 HOXB3P14651 431 aaPredicted RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 RCC1P18754 421 aaPredicted RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 DLX1P56177 255 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 DEFB109BQ30KR1 87 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 SLC25A53Q5H9E4 307 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 C1orf210Q8IVY1 113 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 NEUROG1Q92886 237 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 FAM60AQ9NP50 221 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 RALYQ9UKM9 306 aaKnown RBP3.81□□□□□ -1.8
CHD9-201ENST00000219084 UFC1Q9Y3C8 167 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 TMEM56-RWDD3S4R434 201 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms