RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 THBS3P49746 956 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 PIGPP57054 158 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 OR2B11Q5JQS5 317 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 ZNF486Q96H40 463 aaPredicted RBP21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 SCGB3A2Q96PL1 93 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 RTBDNQ9BSG5 229 aaPredicted RBP21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 DPAGT1Q9H3H5 408 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 VGLL3A8MV65 326 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 H3BUX3 64 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 PGLYRP1O75594 196 aaPredicted RBP21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 S100GP29377 79 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 RBMS3Q6XE24 437 aaKnown RBP21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 Q6YL49 198 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 ZNF66Q6ZN08 573 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 TMED4Q7Z7H5 227 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 ENKURQ8TC29 256 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 CAPSLQ8WWF8 208 aa21.91■■□□□ 1.1
CHMP4B-201ENST00000217402 ZFHX3Q15911 3703 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 H0YJW9 148 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 IGHV4-59P01825 116 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 TUSC1Q2TAM9 212 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 ZDHHC22Q8N966 263 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 ADTRPQ96IZ2 230 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 PRDM13Q9H4Q3 707 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 TNFRSF19Q9NS68 423 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 COPZ2Q9P299 210 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 FLVCR2Q9UPI3 526 aa21.9■■□□□ 1.1
CHMP4B-201ENST00000217402 SNRNP70P08621 437 aaKnown RBP21.89■■□□□ 1.09
CHMP4B-201ENST00000217402 HABP2Q14520 560 aaPredicted RBP21.89■■□□□ 1.09
CHMP4B-201ENST00000217402 TBC1D26Q86UD7 250 aa21.89■■□□□ 1.09
CHMP4B-201ENST00000217402 ADAD2Q8NCV1 583 aaKnown RBP21.89■■□□□ 1.09
CHMP4B-201ENST00000217402 OR5AN1Q8NGI8 311 aa21.89■■□□□ 1.09
CHMP4B-201ENST00000217402 H7C2Y5 167 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 HOXA3O43365 443 aaPredicted RBP21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 IGKV1D-33P01593 117 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 IGKV1-33P01594 117 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 APOA2P02652 100 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 IER3P46695 156 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 CATR1Q13166 79 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 HES1Q14469 280 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 FBLN7Q53RD9 439 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 NRARPQ7Z6K4 114 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 DDB2Q92466 427 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 VENTXO95231 258 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 TCRBP04435 133 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 DYNLT3P51808 116 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 LY6EQ16553 131 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 AANATQ16613 207 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 CCDC71LQ8N9Z2 235 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 PIFOQ8TCI5 191 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 C20orf85Q9H1P6 137 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 SLC35D1Q9NTN3 355 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 PRELID3BQ9Y3B1 194 aa21.88■■□□□ 1.09
CHMP4B-201ENST00000217402 RNF212BA8MTL3 300 aa21.87■■□□□ 1.09
CHMP4B-201ENST00000217402 ARPC1BO15143 372 aaKnown RBP21.87■■□□□ 1.09
CHMP4B-201ENST00000217402 AKR1C4P17516 323 aa21.87■■□□□ 1.09
CHMP4B-201ENST00000217402 CD1BP29016 333 aa21.87■■□□□ 1.09
CHMP4B-201ENST00000217402 RND3P61587 244 aa21.87■■□□□ 1.09
CHMP4B-201ENST00000217402 SSMEM1Q8WWF3 244 aa21.87■■□□□ 1.09
CHMP4B-201ENST00000217402 DUX5Q96PT3 197 aa21.87■■□□□ 1.09
CHMP4B-201ENST00000217402 NUDT15Q9NV35 164 aa21.87■■□□□ 1.09
CHMP4B-201ENST00000217402 WASHC3Q9Y3C0 194 aa21.87■■□□□ 1.09
CHMP4B-201ENST00000217402 MPPED1O15442 326 aa21.86■■□□□ 1.09
CHMP4B-201ENST00000217402 FCGR3BO75015 233 aa21.86■■□□□ 1.09
CHMP4B-201ENST00000217402 MC5RP33032 325 aa21.86■■□□□ 1.09
CHMP4B-201ENST00000217402 HNF4GQ14541 408 aa21.86■■□□□ 1.09
CHMP4B-201ENST00000217402 ZNF418Q8TF45 676 aaPredicted RBP21.86■■□□□ 1.09
CHMP4B-201ENST00000217402 TMEM230Q96A57 120 aa21.86■■□□□ 1.09
CHMP4B-201ENST00000217402 TRAV6A0A075B6T7 132 aa21.85■■□□□ 1.09
CHMP4B-201ENST00000217402 BTBD17A6NE02 478 aa21.85■■□□□ 1.09
CHMP4B-201ENST00000217402 FAM90A9PA6NNJ1 464 aa21.85■■□□□ 1.09
CHMP4B-201ENST00000217402 IGKV1-16P04430 117 aa21.85■■□□□ 1.09
CHMP4B-201ENST00000217402 FAM106CPP0CH98 169 aa21.85■■□□□ 1.09
CHMP4B-201ENST00000217402 RTL8BQ17RB0 113 aa21.85■■□□□ 1.09
CHMP4B-201ENST00000217402 CENPSQ8N2Z9 138 aa21.85■■□□□ 1.09
CHMP4B-201ENST00000217402 TEX13DA0A0J9YY54 714 aaPredicted RBP21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 F2RP25116 425 aa21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 LIN7CQ9NUP9 197 aaKnown RBP21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 RAMP3O60896 148 aa21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 PEX14O75381 377 aa21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 BRWD1-AS2P59051 145 aa21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 TMEM219Q86XT9 240 aa21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 PDPNQ86YL7 162 aa21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 SPAG16Q8N0X2 631 aa21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 EAF1Q96JC9 268 aaPredicted RBP21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 TCF19Q9Y242 345 aa21.84■■□□□ 1.09
CHMP4B-201ENST00000217402 DNAJC9-AS1A6NH13 148 aa21.83■■□□□ 1.08
CHMP4B-201ENST00000217402 CRYZL1O95825 349 aa21.83■■□□□ 1.08
CHMP4B-201ENST00000217402 MOSP00540 346 aa21.83■■□□□ 1.08
CHMP4B-201ENST00000217402 TMEM11P17152 192 aa21.83■■□□□ 1.08
CHMP4B-201ENST00000217402 TAGLNQ01995 201 aaKnown RBP21.83■■□□□ 1.08
CHMP4B-201ENST00000217402 CBX3Q13185 183 aa21.83■■□□□ 1.08
CHMP4B-201ENST00000217402 OR2T10Q8NGZ9 312 aa21.83■■□□□ 1.08
CHMP4B-201ENST00000217402 OR5R1Q8NH85 324 aa21.83■■□□□ 1.08
CHMP4B-201ENST00000217402 ESM1Q9NQ30 184 aa21.83■■□□□ 1.08
CHMP4B-201ENST00000217402 CRYM-AS1A6NIL9 109 aa21.82■■□□□ 1.08
CHMP4B-201ENST00000217402 ANXA7P20073 488 aaKnown RBP21.82■■□□□ 1.08
CHMP4B-201ENST00000217402 THNSL2Q86YJ6 484 aa21.82■■□□□ 1.08
CHMP4B-201ENST00000217402 RITA1Q96K30 269 aa21.82■■□□□ 1.08
CHMP4B-201ENST00000217402 NAA60Q9H7X0 242 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms