RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 ATG12O94817 140 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 GOSR1O95249 250 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 TPT1P13693 172 aaKnown RBP12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 MMP9P14780 707 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 PVALBP20472 110 aaPredicted RBP12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 ERVFRD-1P60508 538 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 GPR157Q5UAW9 335 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 LYG1Q8N1E2 194 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 ZNF843Q8N446 348 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 MAGT1Q9H0U3 335 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 ZC4H2Q9NQZ6 224 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 LYRM2Q9NU23 88 aaPredicted RBP12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 FBXL17Q9UF56 701 aa12.81□□□□□ -0.36
LAPTM4A-201ENST00000175091 GPR37O15354 613 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 C1QL1O75973 258 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 NXPH3O95157 252 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 KRASP01116 189 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 RNF224P0DH78 156 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 G6PCP35575 357 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 TMEM33P57088 247 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 OR2C3Q8N628 320 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 TIMD4Q96H15 378 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 CHODLQ9H9P2 273 aa12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 RALYQ9UKM9 306 aaKnown RBP12.8□□□□□ -0.36
LAPTM4A-201ENST00000175091 MARCH11A6NNE9 402 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 FCGR3BO75015 233 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 TMEM50AO95807 157 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 CDKN1AP38936 164 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 KIR2DS2P43631 304 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 MIDNQ504T8 468 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 ZNF295-AS1Q8N0V1 137 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 PCNPQ8WW12 178 aaKnown RBP12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 RAB1CQ92928 201 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 RAB39BQ96DA2 213 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 A0A087X0M5 115 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 A0A1B0GX30 115 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 LINC00862A6NCI5 91 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 FAM90A26D6RGX4 464 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 WRBO00258 174 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 HPRT1P00492 218 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 GAPDHP04406 335 aaKnown RBP12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 NMBP08949 121 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 THBS3P49746 956 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 RAB14P61106 215 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 EWSR1Q01844 656 aaKnown RBP eCLIP12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 BAP18Q8IXM2 172 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 C8orf31Q8N9H6 132 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 OR8B3Q8NGG8 313 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 ZNF596Q8TC21 504 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 NEIL1Q96FI4 390 aaPredicted RBP12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 OR8B2Q96RD0 313 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 MIOXQ9UGB7 285 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 PRELID3BQ9Y3B1 194 aa12.79□□□□□ -0.36
LAPTM4A-201ENST00000175091 MALRD1Q5VYJ5 2156 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 TOR1AO14656 332 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 PPIHO43447 177 aaKnown RBP12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 PAX9P55771 341 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 VAMP2P63027 116 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 RPL7L1Q6DKI1 246 aaKnown RBP12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 C11orf42Q8N5U0 333 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 C8orf46Q8TAG6 207 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 ADTRPQ96IZ2 230 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 S1PR3Q99500 378 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 ZNRD1Q9P1U0 126 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 AUP1Q9Y679 476 aa12.78□□□□□ -0.36
LAPTM4A-201ENST00000175091 IGSF23A1L1A6 192 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 CHST1O43916 411 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 IGHV1-8P0DP01 117 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 CAV2P51636 162 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 WDR25Q64LD2 544 aaPredicted RBP12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 ZNF833PQ6ZTB9 187 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 LINC00311Q8N616 119 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 ZNF383Q8NA42 475 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 OR4S2Q8NH73 311 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 R3HDM4Q96D70 268 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 BSCL2Q96G97 398 aaPredicted RBP12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 RAB40CQ96S21 281 aa12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 KLF2Q9Y5W3 355 aaPredicted RBP12.77□□□□□ -0.36
LAPTM4A-201ENST00000175091 FAM24AA6NFZ4 105 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 SYNGR2O43760 224 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 FAM74A1Q5RGS3 127 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 CLEC9AQ6UXN8 241 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 TMEM252Q8N6L7 170 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 HSPB7Q9UBY9 170 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 WSB1Q9Y6I7 421 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 NDUFS7O75251 213 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 RBP4P02753 201 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 EIF5AP63241 154 aaKnown RBP12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 NHLH2Q02577 135 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 TNFRSF9Q07011 255 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 H2BFWTQ7Z2G1 175 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 UBAC2Q8NBM4 344 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 SLC25A31Q9H0C2 315 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 SLC25A32Q9H2D1 315 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 SESN1Q9Y6P5 492 aa12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 SPTAN1Q13813 2472 aaKnown RBP12.76□□□□□ -0.37
LAPTM4A-201ENST00000175091 FAM90A9PA6NNJ1 464 aa12.75□□□□□ -0.37
LAPTM4A-201ENST00000175091 J3QR06 171 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms