RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ANKRD11Q6UB99 2663 aaPredicted RBP11.02□□□□□ -0.65
CTNS-201ENST00000046640 A0A087WWC5 75 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 SEC14L6B5MCN3 397 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 C12orf77C9JDV5 145 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 SYNGR2O43760 224 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 DFFBO76075 338 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 NDUFB7P17568 137 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 ZNF83P51522 516 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 RTP5Q14D33 572 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 ZNF146Q15072 292 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 FIP1L1Q6UN15 594 aaKnown RBP11.02□□□□□ -0.65
CTNS-201ENST00000046640 SLC35E3Q7Z769 313 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 HAPLN4Q86UW8 402 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 OR8G5Q8NG78 346 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 GATAD1Q8WUU5 269 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 SARAFQ96BY9 339 aa11.02□□□□□ -0.65
CTNS-201ENST00000046640 TRBV6-6A0A0A6YYG2 114 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 ZNF124Q15973 351 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 ACSF3Q4G176 576 aaPredicted RBP11.01□□□□□ -0.65
CTNS-201ENST00000046640 OR2Z1Q8NG97 314 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 OR4C12Q96R67 309 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 DKK4Q9UBT3 224 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 OR5H1A6NKK0 313 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 CLDN34H7C241 214 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 K7EM74 188 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 IGKV3-15P01624 115 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 HIST1H1BP16401 226 aaKnown RBP11.01□□□□□ -0.65
CTNS-201ENST00000046640 Q8IYB0 196 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 SLC25A22Q9H936 323 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 AURKAIP1Q9NWT8 199 aaPredicted RBP11.01□□□□□ -0.65
CTNS-201ENST00000046640 KCNIP1Q9NZI2 227 aa11.01□□□□□ -0.65
CTNS-201ENST00000046640 ZNF318Q5VUA4 2279 aa11□□□□□ -0.65
CTNS-201ENST00000046640 MAP1LC3B2A6NCE7 125 aa11□□□□□ -0.65
CTNS-201ENST00000046640 CLDN1O95832 211 aa11□□□□□ -0.65
CTNS-201ENST00000046640 GCH1P30793 250 aa11□□□□□ -0.65
CTNS-201ENST00000046640 G6PCP35575 357 aa11□□□□□ -0.65
CTNS-201ENST00000046640 SPRNQ5BIV9 151 aa11□□□□□ -0.65
CTNS-201ENST00000046640 WDR82Q6UXN9 313 aa11□□□□□ -0.65
CTNS-201ENST00000046640 LHX4Q969G2 390 aa11□□□□□ -0.65
CTNS-201ENST00000046640 STARD4Q96DR4 205 aa11□□□□□ -0.65
CTNS-201ENST00000046640 ABHD14BQ96IU4 210 aa11□□□□□ -0.65
CTNS-201ENST00000046640 PACRGQ96M98 296 aaPredicted RBP11□□□□□ -0.65
CTNS-201ENST00000046640 MAP1LC3BQ9GZQ8 125 aa11□□□□□ -0.65
CTNS-201ENST00000046640 SIRT7Q9NRC8 400 aa11□□□□□ -0.65
CTNS-201ENST00000046640 PLCE1Q9P212 2302 aa11□□□□□ -0.65
CTNS-201ENST00000046640 IGHV3OR15-7A0A075B7D8 119 aa11□□□□□ -0.65
CTNS-201ENST00000046640 IGHV1-18A0A0C4DH31 117 aa11□□□□□ -0.65
CTNS-201ENST00000046640 PRR33A8MZF0 331 aa11□□□□□ -0.65
CTNS-201ENST00000046640 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11□□□□□ -0.65
CTNS-201ENST00000046640 AQP7O14520 342 aa11□□□□□ -0.65
CTNS-201ENST00000046640 PHOX2AO14813 284 aa11□□□□□ -0.65
CTNS-201ENST00000046640 ZNF737O75373 536 aa11□□□□□ -0.65
CTNS-201ENST00000046640 TNFSF13O75888 250 aa11□□□□□ -0.65
CTNS-201ENST00000046640 HBZP02008 142 aa11□□□□□ -0.65
CTNS-201ENST00000046640 MDH2P40926 338 aaKnown RBP11□□□□□ -0.65
CTNS-201ENST00000046640 RPL30P62888 115 aaKnown RBP11□□□□□ -0.65
CTNS-201ENST00000046640 COL10A1Q03692 680 aa11□□□□□ -0.65
CTNS-201ENST00000046640 ZNF525Q8N782 197 aa11□□□□□ -0.65
CTNS-201ENST00000046640 CA5BP1Q8WTZ4 195 aa11□□□□□ -0.65
CTNS-201ENST00000046640 GALMQ96C23 342 aa11□□□□□ -0.65
CTNS-201ENST00000046640 COQ2Q96H96 371 aa11□□□□□ -0.65
CTNS-201ENST00000046640 SMIM7Q9BQ49 75 aa11□□□□□ -0.65
CTNS-201ENST00000046640 SLC39A9Q9NUM3 307 aa11□□□□□ -0.65
CTNS-201ENST00000046640 KIAA1324LA8MWY0 1029 aaPredicted RBP10.99□□□□□ -0.65
CTNS-201ENST00000046640 CEACAM1P13688 526 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 CD82P27701 267 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 GUSBP1Q15486 140 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 MSMPQ1L6U9 139 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 SEM1Q6ZVN7 128 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 FGFRL1Q8N441 504 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 WFIKKN1Q96NZ8 548 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 PROCRQ9UNN8 238 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 LAMP3Q9UQV4 416 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.99□□□□□ -0.65
CTNS-201ENST00000046640 A0A1B0GU03 582 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 CLEC18AA5D8T8 446 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 ACP7Q6ZNF0 438 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 C16orf82Q7Z2V1 217 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 CLEC18CQ8NCF0 446 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 C5orf30Q96GV9 206 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 RAB40CQ96S21 281 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 ELOVL1Q9BW60 279 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 FAM234AQ9H0X4 552 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 SDF2L1Q9HCN8 221 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 MUC6Q6W4X9 2439 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 IGHV2OR16-5A0A0B4J2B6 119 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 TMEM30CPA0ZSE6 113 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 M0R1B8 84 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 RBMXL2O75526 392 aaKnown RBP10.99□□□□□ -0.65
CTNS-201ENST00000046640 CYB5R3P00387 301 aaPredicted RBP10.99□□□□□ -0.65
CTNS-201ENST00000046640 IGKV1D-33P01593 117 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 IGKV1-33P01594 117 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 FAM201AQ5SY85 155 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 SP5Q6BEB4 398 aaPredicted RBP10.99□□□□□ -0.65
CTNS-201ENST00000046640 REC114Q7Z4M0 266 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 OR13A1Q8NGR1 328 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 LRRC29Q8WV35 223 aa10.99□□□□□ -0.65
CTNS-201ENST00000046640 MBNL3Q9NUK0 354 aaKnown RBP10.99□□□□□ -0.65
CTNS-201ENST00000046640 CISD1Q9NZ45 108 aaKnown RBP10.99□□□□□ -0.65
CTNS-201ENST00000046640 APC2O95996 2303 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms