RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Olfr773F6VS78 311 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ercc1P07903 298 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 PpicP30412 212 aaKnown RBP12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Pax4P32115 349 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 SeboxP70368 190 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Nr2c2apQ3TV70 140 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ly6eQ64253 130 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Stk17bQ8BG48 372 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gm10600Q8BQ57 223 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gpr89aQ8BS95 455 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr772Q8VGC5 311 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Abhd3Q91ZH7 411 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vgll1Q99NC0 307 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Smim8Q9CQQ0 97 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Slc25a22Q9D6M3 323 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Hspb9Q9DAM3 168 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Sp5Q9JHX2 398 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 IckQ9JKV2 629 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Itln1O88310 313 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Nkx2-1P50220 372 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vmn1r181Q0P547 304 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Col19a1Q0VF58 1136 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1028Q7TR89 324 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1269Q8VEZ2 309 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Pmaip1Q9JM54 103 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rad1Q9QWZ1 280 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Pla2g2fQ9QZT4 168 aa12.87□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr587-ps1A0A1B0GSS1 159 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gm4175D3YTW8 314 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr902E9Q6Z7 309 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vmn1r114L7N226 321 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vmn1r126L7N2C8 321 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Wnt1P04426 370 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Mdga2P60755 949 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gpr173Q6PI62 373 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr715Q8VG49 315 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Zdbf2Q5SS00 2493 aaKnown RBP12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rsg1A2A825 258 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ube2dnl1A2AFH1 155 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Adamtsl5D3Z689 485 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vmn1r160E9Q346 307 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr555E9Q547 315 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr430E9Q5F1 317 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vmn1r123L7N270 307 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Sh2b3O09039 548 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 DxoO70348 397 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Foxh1O88621 401 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ifna7P06799 190 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Itgb2P11835 771 aaKnown RBP12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vamp2P63044 116 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Q3U6N9 222 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Tle4Q62441 773 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Znf629Q6A085 867 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Spcs3Q6ZWQ7 180 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 LgalslbQ7TPX9 165 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1299Q7TQX5 312 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 MepeQ8K4L6 441 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr1141Q8VFQ7 311 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Cln8Q9QUK3 288 aa12.86□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 A0A286YCH8 300 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 3110040M04RikA0A286YDK0 300 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 A0A286YE43 300 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Col9a3A2ACT7 680 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vmn1r194J3JS27 296 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 EcscrQ3TZW0 214 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Zfp36l3Q5ISE2 725 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Fbxo22Q78JE5 402 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 9130023H24RikQ8BG98 337 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Zpld1Q8BGZ8 415 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 SargQ8BI29 606 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ddah2Q99LD8 285 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Cdc42ep3Q9CQC5 254 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ints12Q9D168 461 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Tmem126bQ9D1R1 230 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Srxn1Q9D975 136 aa12.85□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ube2dnl2A2AFH2 155 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vmn1r204I7HIK1 302 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Hbb-yP02104 147 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rab11aP62492 216 aaKnown RBP12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Htr2bQ02152 479 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 SryQ05738 395 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Mpzl1Q3TEW6 270 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rnase11Q5GAM9 192 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Q6PIU9 354 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Znrf2Q71FD5 238 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Slc25a29Q8BL03 306 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Crispld2Q8BZQ2 495 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Tmem56Q8CGF5 276 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Pitpnc1Q8K4R4 332 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Olfr642Q924X8 314 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Mrps28Q9CY16 186 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Mageh1Q9NWG9 218 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Ice1E9Q286 2241 aaKnown RBP12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Trav12n-2A0A075B626 113 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Gm36864A0A1Y7VJE6 447 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Vmn1r180B9EK86 305 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Fcgr1P26151 404 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Rtp2Q80ZI2 223 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Acp7Q8BX37 438 aa12.84□□□□□ -0.35
Ushbp1-201ENSMUST00000049184 Tbx19Q99ME7 446 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms