RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 HES1Q14469 280 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 MSMO1Q15800 293 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 SSX2Q16385 188 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 RTL8BQ17RB0 113 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 RGS21Q2M5E4 152 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 TPTE2P1Q5T6R2 138 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 PLET1Q6UQ28 207 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 IL17RELQ6ZVW7 336 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 Q71RC1 249 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-218ENST00000641491 OR4P4Q8NGL7 312 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 TCTEX1D2Q8WW35 142 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 HSD17B10Q99714 261 aaKnown RBP10.54□□□□□ -0.72
PHGDH-218ENST00000641491 TOLLIPQ9H0E2 274 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 FXYD6Q9H0Q3 95 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 IFI27L2Q9H2X8 130 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 LIN7CQ9NUP9 197 aaKnown RBP10.54□□□□□ -0.72
PHGDH-218ENST00000641491 PIGBOS1A0A0B4J2F0 54 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 OR5H14A6NHG9 310 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 TNFSF12O43508 249 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 KIR2DS2P43631 304 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 REG1BP48304 166 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 THBS3P49746 956 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 UCP3P55916 312 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 TAGLNQ01995 201 aaKnown RBP10.53□□□□□ -0.72
PHGDH-218ENST00000641491 BAMBIQ13145 260 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 PHLDA2Q53GA4 152 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 ZNF66Q6ZN08 573 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 KCTD9Q7L273 389 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 SGPP2Q8IWX5 399 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 OR8H3Q8N146 312 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 CENPSQ8N2Z9 138 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 ZDHHC22Q8N966 263 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 ZNF439Q8NDP4 499 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 OR13C8Q8NGS7 320 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 SMR3AQ99954 134 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 KCNIP3Q9Y2W7 256 aa10.53□□□□□ -0.72
PHGDH-218ENST00000641491 STAB1Q9NY15 2570 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 PTTG1O95997 202 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 IGLV1-47P01700 117 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 CTSDP07339 412 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-218ENST00000641491 RRASP10301 218 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 CCR6P51684 374 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 RPL39P5Q59GN2 51 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 FAM53AQ6NSI3 398 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-218ENST00000641491 RNASE11Q8TAA1 199 aaKnown RBP10.52□□□□□ -0.73
PHGDH-218ENST00000641491 PARP12Q9H0J9 701 aaKnown RBP10.52□□□□□ -0.73
PHGDH-218ENST00000641491 OCEL1Q9H607 264 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 CCL28Q9NRJ3 127 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 SDHAF2Q9NX18 166 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 NUBP2Q9Y5Y2 271 aa10.52□□□□□ -0.73
PHGDH-218ENST00000641491 IGKV1D-13A0A0B4J2D9 117 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 A0A0U1RQK1 487 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 ATG12O94817 140 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 NDUFB6O95139 128 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 AVPP01185 164 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 SERPINE2P07093 398 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 FAM106CPP0CH98 169 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 IGKV1-13P0DP09 117 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 AKR1C4P17516 323 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 MC5RP33032 325 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF134P52741 427 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 PIGPP57054 158 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF816Q0VGE8 651 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-218ENST00000641491 LRRC75BQ2VPJ9 315 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 TRIM16LQ309B1 348 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 C4orf46Q504U0 113 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 HCP5Q6MZN7 132 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF818PQ6ZRF7 136 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF833PQ6ZTB9 187 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 LHFPL4Q7Z7J7 247 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 LHFPL1Q86WI0 220 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 DRAM1Q8N682 238 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 BVESQ8NE79 360 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 OR51H1Q8NH63 302 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 CD300LFQ8TDQ1 290 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF418Q8TF45 676 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-218ENST00000641491 RTN4IP1Q8WWV3 396 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-218ENST00000641491 C22orf15Q8WYQ4 148 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 RSRP1Q9BUV0 290 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 MRPL20Q9BYC9 149 aaKnown RBP10.51□□□□□ -0.73
PHGDH-218ENST00000641491 C20orf85Q9H1P6 137 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 SLC2A9Q9NRM0 540 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 ZNRD1Q9P1U0 126 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 PITPNC1Q9UKF7 332 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 TBC1D24Q9ULP9 559 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 GAB2Q9UQC2 676 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 DOCK11Q5JSL3 2073 aa10.51□□□□□ -0.73
PHGDH-218ENST00000641491 IGHV1-3A0A0C4DH29 117 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 ARPC1BO15143 372 aaKnown RBP10.5□□□□□ -0.73
PHGDH-218ENST00000641491 B3GALNT1O75752 331 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF735P0CB33 412 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 VAMP1P23763 118 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 ERVK-16P61578 105 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 KRTAP1-1Q07627 177 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 KLF17Q5JT82 389 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-218ENST00000641491 ZNF660Q6AZW8 331 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-218ENST00000641491 OR4S2Q8NH73 311 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
PHGDH-218ENST00000641491 AIFM2Q9BRQ8 373 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms