RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 LHX2P50458 406 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 POLR2HP52434 150 aaKnown RBP3.19□□□□□ -1.9
CCDC7-214ENST00000639453 CDK6Q00534 326 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 PSG9Q00887 426 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 FABP5Q01469 135 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 MEF2CQ06413 473 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-214ENST00000639453 PAX8Q06710 450 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 INCA1Q0VD86 236 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 SLC10A1Q14973 349 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 MLF2Q15773 248 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-214ENST00000639453 TIMM50Q3ZCQ8 353 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 PABPC1L2AQ5JQF8 200 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 ZNF506Q5JVG8 444 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 SLC25A30Q5SVS4 291 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 ALKAL1Q6UXT8 129 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 TCF23Q7RTU1 214 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 SNX29P2Q8IUI4 249 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 C9orf62Q8N4C0 152 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 ZNF615Q8N8J6 731 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 SUMF1Q8NBK3 374 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 PRSS33Q8NF86 280 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 OR2T4Q8NH00 348 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 SSC4DQ8WTU2 575 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 FAM151AQ8WW52 585 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 GEMIN6Q8WXD5 167 aaKnown RBP3.19□□□□□ -1.9
CCDC7-214ENST00000639453 FGF14Q92915 247 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 HIST1H2BAQ96A08 127 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 TM4SF18Q96CE8 201 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 SLAMF6Q96DU3 332 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 TMEM101Q96IK0 257 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 C18orf12Q96KH6 178 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 ZNF184Q99676 751 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-214ENST00000639453 OR8D2Q9GZM6 311 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 TMEM222Q9H0R3 208 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 RERGLQ9H628 205 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 PTGES2Q9H7Z7 377 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 ZNF629Q9UEG4 869 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-214ENST00000639453 PRO0461Q9UI25 63 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 SNX12Q9UMY4 172 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 RFNGQ9Y644 331 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 SOX21Q9Y651 276 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-214ENST00000639453 PXMP4Q9Y6I8 212 aa3.19□□□□□ -1.9
CCDC7-214ENST00000639453 MAGI1Q96QZ7 1491 aaPredicted RBP3.19□□□□□ -1.9
CCDC7-214ENST00000639453 CARMIL3Q8ND23 1372 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 IGKV1D-8A0A087WSZ0 117 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 A0A087X002 238 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 TRAV8-1A0A0A6YYK1 113 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 PLAC8L1A1L4L8 177 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 MEIS3P1A6NDR6 274 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 SIGLEC16A6NMB1 481 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 IFITM5A6NNB3 132 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 BBIP1A8MTZ0 92 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 ZNF705EA8MWA4 302 aaPredicted RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 C12orf77C9JDV5 145 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 AGPAT2O15120 278 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 RTL8CO15255 209 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 BCL2L11O43521 198 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 ZNF207O43670 478 aaKnown RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 DUS4LO95620 317 aaKnown RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 SCTP09683 121 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 OR12D1P0DN82 309 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 VDAC1P21796 283 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 PPIBP23284 216 aaKnown RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 RPS3P23396 243 aaKnown RBP eCLIP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 KDELR1P24390 212 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 SRIP30626 198 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 CTRLP40313 264 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 VDAC2P45880 294 aaPredicted RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 CTBP2P56545 445 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 RPS24P62847 133 aaKnown RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 C11orf71Q6IPW1 123 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 ZNF620Q6ZNG0 422 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 ATP5L2Q7Z4Y8 100 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 LRRTM1Q86UE6 522 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 SLC22A18ASQ8N1D0 253 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 TMEM178AQ8NBL3 297 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 OR11H7Q8NGC8 314 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 PPTC7Q8NI37 304 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 ADAT3Q96EY9 351 aaPredicted RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 IP6K3Q96PC2 410 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 TRIB3Q96RU7 358 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 NMNAT3Q96T66 252 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 SYT15Q9BQS2 421 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 PRADC1Q9BSG0 188 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 THTPAQ9BU02 230 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 MRPL20Q9BYC9 149 aaKnown RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 SRXN1Q9BYN0 137 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 NKX6-2Q9C056 277 aaPredicted RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 MED28Q9H204 178 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 EDA2RQ9HAV5 297 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 DEPPQ9NTK1 212 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 FAM49BQ9NUQ9 324 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 SPRR3Q9UBC9 169 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 MTFP1Q9UDX5 166 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 HS3ST2Q9Y278 367 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 KLF13Q9Y2Y9 288 aaPredicted RBP3.18□□□□□ -1.9
CCDC7-214ENST00000639453 HEBP2Q9Y5Z4 205 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 ENPP4Q9Y6X5 453 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 NALCNQ8IZF0 1738 aa3.18□□□□□ -1.9
CCDC7-214ENST00000639453 ADAMTSL3P82987 1691 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms