RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 FCGR2CP31995 323 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 LOXL3P58215 753 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 HERV-K104P61576 105 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 SSX2Q16385 188 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 IGSF11Q5DX21 431 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 MINOS1Q5TGZ0 78 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 AADACL3Q5VUY0 350 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 CENPSQ8N2Z9 138 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 ZBTB34Q8NCN2 500 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 UBALD1Q8TB05 177 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 ZNF596Q8TC21 504 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 ZFAND1Q8TCF1 268 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 LEAP2Q969E1 77 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 GFOD1Q9NXC2 390 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 GPR132Q9UNW8 380 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 GAB2Q9UQC2 676 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 HILPDAQ9Y5L2 63 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 MINOS1-NBL1R4GNA1 71 aa7.97□□□□□ -1.13
CLN3-261ENST00000637686 H3BUX3 64 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 SDCBPO00560 298 aaPredicted RBP7.96□□□□□ -1.14
CLN3-261ENST00000637686 TOR1AO14656 332 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 PRAF2O60831 178 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 PEX14O75381 377 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 CRYBA1P05813 215 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 CTSDP07339 412 aaPredicted RBP7.96□□□□□ -1.14
CLN3-261ENST00000637686 HTR1DP28221 377 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 RAB7AP51149 207 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 RAB13P51153 203 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 CCR6P51684 374 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 PRRX1P54821 245 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 TAS2R31P59538 309 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 RND3P61587 244 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 LY6EQ16553 131 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 LRRC75BQ2VPJ9 315 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 FAAP20Q6NZ36 180 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 Q6ZNX1 250 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 SLC38A6Q8IZM9 456 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 LINC00311Q8N616 119 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 OR4P4Q8NGL7 312 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 OR5R1Q8NH85 324 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 OR1L1Q8NH94 360 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 MRGPRFQ96AM1 343 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 AKR1E2Q96JD6 320 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 ZNF2Q9BSG1 426 aaPredicted RBP7.96□□□□□ -1.14
CLN3-261ENST00000637686 C20orf85Q9H1P6 137 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 OR2S2Q9NQN1 319 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 DPM3Q9P2X0 92 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 VPREB3Q9UKI3 123 aa7.96□□□□□ -1.14
CLN3-261ENST00000637686 OR5H14A6NHG9 310 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 BUB1B-PAK6H3BSN5 160 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 J3QR06 171 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 BET1O15155 118 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 GPR137BO60478 399 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 B3GALNT1O75752 331 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 DHFRP00374 187 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 IGLV1-47P01700 117 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 IL5P05113 134 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 H2AFB2P0C5Z0 115 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 AADACP22760 399 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 CEACAM6P40199 344 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 COMPP49747 757 aaPredicted RBP7.95□□□□□ -1.14
CLN3-261ENST00000637686 GNG10P50151 68 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 LUMP51884 338 aaPredicted RBP7.95□□□□□ -1.14
CLN3-261ENST00000637686 FOXL1Q12952 345 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 AANATQ16613 207 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 HLA-DRB5Q30154 266 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 SCGB2B2Q4G0G5 96 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 MORN2Q502X0 79 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 AWAT1Q58HT5 328 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 FAM53AQ6NSI3 398 aaPredicted RBP7.95□□□□□ -1.14
CLN3-261ENST00000637686 C11orf88Q6PI97 169 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 C12orf54Q6X4T0 127 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 C5orf24Q7Z6I8 188 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 PRR18Q8N4B5 295 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.95□□□□□ -1.14
CLN3-261ENST00000637686 ZNF439Q8NDP4 499 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 OR10V1Q8NGI7 309 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 OR9G1Q8NH87 305 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 PIFOQ8TCI5 191 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 IL1F10Q8WWZ1 152 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 RSRP1Q9BUV0 290 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 FXYD6Q9H0Q3 95 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 NUDT15Q9NV35 164 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 RDH8Q9NYR8 311 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 C1RLQ9NZP8 487 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 GNG12Q9UBI6 72 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 PSG11Q9UQ72 335 aa7.95□□□□□ -1.14
CLN3-261ENST00000637686 IGHV3-43A0A0B4J1X8 118 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 PIGBOS1A0A0B4J2F0 54 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 A0A1W2PPE3 182 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 VGLL3A8MV65 326 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 LEUTXA8MZ59 168 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 INMT-MINDY4F8WBC2 141 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 LY6LH3BQJ8 138 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 IGHV3-43DP0DP04 118 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 NFYAP23511 347 aaPredicted RBP7.94□□□□□ -1.14
CLN3-261ENST00000637686 S100GP29377 79 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 ZNF137PP52743 207 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 RELBQ01201 579 aa7.94□□□□□ -1.14
CLN3-261ENST00000637686 DHODHQ02127 395 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms