RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 CEACAM3P40198 252 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 TAGLNQ01995 201 aaKnown RBP10.89□□□□□ -0.67
LINC00643-207ENST00000637212 TATDN3Q17R31 274 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 MIDNQ504T8 468 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 MINOS1Q5TGZ0 78 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 ZNF833PQ6ZTB9 187 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 LYG2Q86SG7 212 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 TBC1D26Q86UD7 250 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 MAPK1IP1LQ8NDC0 245 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 ZNF431Q8TF32 576 aaPredicted RBP10.89□□□□□ -0.67
LINC00643-207ENST00000637212 ZNF251Q9BRH9 671 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 NAA60Q9H7X0 242 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 DPM3Q9P2X0 92 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 ITGB1BP2Q9UKP3 347 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 MINOS1-NBL1R4GNA1 71 aa10.89□□□□□ -0.67
LINC00643-207ENST00000637212 SAA2-SAA4A0A096LPE2 208 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 A0A0A6YYJ9 748 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 A0A0B4J2A0 478 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 PIGBOS1A0A0B4J2F0 54 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 C3orf85A0A1B0GTC6 90 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 M0R1X1 148 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 DUS4LO95620 317 aaKnown RBP10.88□□□□□ -0.67
LINC00643-207ENST00000637212 IFNA2P01563 188 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 GAPDHP04406 335 aaKnown RBP10.88□□□□□ -0.67
LINC00643-207ENST00000637212 ARG1P05089 322 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 SAA2P0DJI9 122 aaPredicted RBP10.88□□□□□ -0.67
LINC00643-207ENST00000637212 ANXA3P12429 323 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 HOXB4P17483 251 aaPredicted RBP10.88□□□□□ -0.67
LINC00643-207ENST00000637212 EPHA1P21709 976 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 BPIFB3P59826 476 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 SUPT4H1P63272 117 aaKnown RBP10.88□□□□□ -0.67
LINC00643-207ENST00000637212 CATR1Q13166 79 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 PPP1R1AQ13522 171 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 CIARTQ8N365 385 aaPredicted RBP10.88□□□□□ -0.67
LINC00643-207ENST00000637212 OR4P4Q8NGL7 312 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 CD300LFQ8TDQ1 290 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 CAPSLQ8WWF8 208 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 LHX4Q969G2 390 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 BEX2Q9BXY8 128 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 BEX1Q9HBH7 125 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 SHPKQ9UHJ6 478 aa10.88□□□□□ -0.67
LINC00643-207ENST00000637212 TBL2Q9Y4P3 447 aaKnown RBP10.88□□□□□ -0.67
LINC00643-207ENST00000637212 PDZD2O15018 2839 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 CENPVL3A0A0U1RRI6 287 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 OOSP1A8MZH6 123 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 TXNL1O43396 289 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 CREBL2O60519 120 aaPredicted RBP10.87□□□□□ -0.67
LINC00643-207ENST00000637212 VAMP1P23763 118 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 DUTP33316 252 aaKnown RBP10.87□□□□□ -0.67
LINC00643-207ENST00000637212 KIR2DS2P43631 304 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 THBS3P49746 956 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 DLX1P56177 255 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 LGALS4P56470 323 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 DHRS2Q13268 280 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 RPL39P5Q59GN2 51 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 C1orf229Q6ZS94 237 aaPredicted RBP10.87□□□□□ -0.67
LINC00643-207ENST00000637212 TEX29Q8N6K0 151 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 MITD1Q8WV92 249 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 MALSU1Q96EH3 234 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 C5orf30Q96GV9 206 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 OR51J1Q9H342 316 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 PRELID3BQ9Y3B1 194 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 ALG5Q9Y673 324 aa10.87□□□□□ -0.67
LINC00643-207ENST00000637212 ANKRD17O75179 2603 aaKnown RBP10.86□□□□□ -0.67
LINC00643-207ENST00000637212 IGHV1-69DA0A0B4J2H0 117 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 H0Y980 276 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 TNFSF12O43508 249 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 IGHV1-69P01742 117 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 HLA-AP01891 365 aaKnown RBP10.86□□□□□ -0.67
LINC00643-207ENST00000637212 CT45A6P0DMU7 189 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 CT45A5P0DMU8 189 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 CT45A7P0DMV0 189 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 MC5RP33032 325 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 SRPXP78539 464 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 ZNF816Q0VGE8 651 aaPredicted RBP10.86□□□□□ -0.67
LINC00643-207ENST00000637212 KLRD1Q13241 179 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 TMEM187Q14656 261 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 TPTE2P1Q5T6R2 138 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 GPR157Q5UAW9 335 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 LRTM2Q8N967 370 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 COQ8AQ8NI60 647 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 PHB2Q99623 299 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 SEC22CQ9BRL7 303 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 TMEM222Q9H0R3 208 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 LIN7CQ9NUP9 197 aaKnown RBP10.86□□□□□ -0.67
LINC00643-207ENST00000637212 ZNRD1Q9P1U0 126 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 CSMD1Q96PZ7 3565 aa10.86□□□□□ -0.67
LINC00643-207ENST00000637212 KIAA2026Q5HYC2 2103 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 PRRC2AP48634 2157 aaKnown RBP10.85□□□□□ -0.67
LINC00643-207ENST00000637212 A0A0B4J293 547 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 SMAD7O15105 426 aaKnown RBP10.85□□□□□ -0.67
LINC00643-207ENST00000637212 NPFFO15130 113 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 RBFOX2O43251 390 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00643-207ENST00000637212 SERPINE2P07093 398 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 RRASP10301 218 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 RPA2P15927 270 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 UCP1P25874 307 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 RPL30P62888 115 aaKnown RBP10.85□□□□□ -0.67
LINC00643-207ENST00000637212 PRB3Q04118 309 aaPredicted RBP10.85□□□□□ -0.67
LINC00643-207ENST00000637212 CCDC144NLQ6NUI1 221 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms