RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 PRB3Q04118 309 aaPredicted RBP17.22■□□□□ 0.35
CLN8-213ENST00000637156 Q3ZCU0 254 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 LYG1Q8N1E2 194 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 ABHD12Q8N2K0 398 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 RAB39BQ96DA2 213 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 SEC22AQ96IW7 307 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 TMEM56Q96MV1 263 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 TMEM133Q9H2Q1 129 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 RAB18Q9NP72 206 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 MMP26Q9NRE1 261 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 TMEM56-RWDD3S4R434 201 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 LINC00473A8K010 186 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 H0Y980 276 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 RAB29O14966 203 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 RBP4P02753 201 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 DSCR9P59020 149 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 LYZL2Q7Z4W2 148 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 C18orf12Q96KH6 178 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 ONECUT1Q9UBC0 465 aa17.22■□□□□ 0.35
CLN8-213ENST00000637156 ANKRD17O75179 2603 aaKnown RBP17.21■□□□□ 0.35
CLN8-213ENST00000637156 NAV2Q8IVL1 2488 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 SAA2-SAA4A0A096LPE2 208 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 A8MXK9 166 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 J3QR06 171 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 SAA2P0DJI9 122 aaPredicted RBP17.21■□□□□ 0.35
CLN8-213ENST00000637156 CLEC12BQ2HXU8 276 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 DEFB113Q30KQ7 82 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 ZNF585BQ52M93 769 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 Q5BKY6 102 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 LGI3Q8N145 548 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 ZNF596Q8TC21 504 aa17.21■□□□□ 0.35
CLN8-213ENST00000637156 FAM157AC9JC47 383 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 C1QBP02746 253 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 ZNF16P17020 682 aaPredicted RBP17.2■□□□□ 0.34
CLN8-213ENST00000637156 DUTP33316 252 aaKnown RBP17.2■□□□□ 0.34
CLN8-213ENST00000637156 IFITM2Q01629 132 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 SELENOHQ8IZQ5 122 aaKnown RBP17.2■□□□□ 0.34
CLN8-213ENST00000637156 C8orf31Q8N9H6 132 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 OR10C1Q96KK4 312 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 HSD17B10Q99714 261 aaKnown RBP17.2■□□□□ 0.34
CLN8-213ENST00000637156 METTL8Q9H825 291 aaKnown RBP17.2■□□□□ 0.34
CLN8-213ENST00000637156 BEX4Q9NWD9 120 aaPredicted RBP17.2■□□□□ 0.34
CLN8-213ENST00000637156 C13orf42A0A1B0GVH6 325 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 FAM25EA8MYX2 175 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 GIPP09681 153 aaPredicted RBP17.2■□□□□ 0.34
CLN8-213ENST00000637156 DNASE1P24855 282 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 SRSF4Q08170 494 aaKnown RBP17.2■□□□□ 0.34
CLN8-213ENST00000637156 ZNF66Q6ZN08 573 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 LINC00311Q8N616 119 aa17.2■□□□□ 0.34
CLN8-213ENST00000637156 hCG_1809904A0A1W2PP81 198 aa17.19■□□□□ 0.34
CLN8-213ENST00000637156 A0A1W2PPE2 198 aa17.19■□□□□ 0.34
CLN8-213ENST00000637156 A0A1W2PR64 198 aa17.19■□□□□ 0.34
CLN8-213ENST00000637156 A0A1W2PRV1 198 aa17.19■□□□□ 0.34
CLN8-213ENST00000637156 B3GALNT1O75752 331 aa17.19■□□□□ 0.34
CLN8-213ENST00000637156 TMEM268Q5VZI3 342 aa17.19■□□□□ 0.34
CLN8-213ENST00000637156 NCR3LG1Q68D85 454 aa17.19■□□□□ 0.34
CLN8-213ENST00000637156 OR2T35Q8NGX2 323 aa17.19■□□□□ 0.34
CLN8-213ENST00000637156 OR9G1Q8NH87 305 aa17.19■□□□□ 0.34
CLN8-213ENST00000637156 C5orf51A6NDU8 294 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 RNF212BA8MTL3 300 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 G3V3Q6 166 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 M0R1W7 72 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 M0R1X1 148 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 RAMP3O60896 148 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 GZMKP49863 264 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 GGNBP1Q5YKI7 109 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 ZNF695Q8IW36 515 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 SLC35G3Q8N808 338 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.18■□□□□ 0.34
CLN8-213ENST00000637156 IGHV2-26A0A0B4J1V2 119 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 ENSAO43768 121 aaKnown RBP17.18■□□□□ 0.34
CLN8-213ENST00000637156 IGKV1-39P01597 117 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 IGKV1D-39P04432 117 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 SERPINE2P07093 398 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 C1orf122Q6ZSJ8 110 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 TCTEX1D2Q8WW35 142 aa17.18■□□□□ 0.34
CLN8-213ENST00000637156 LIN7CQ9NUP9 197 aaKnown RBP17.18■□□□□ 0.34
CLN8-213ENST00000637156 POLR3KQ9Y2Y1 108 aaPredicted RBP17.18■□□□□ 0.34
CLN8-213ENST00000637156 FOXH1O75593 365 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 IGLV1-47P01700 117 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 RAP2BP61225 183 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 SRPXP78539 464 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 OR2B11Q5JQS5 317 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 GSG1LQ6UXU4 331 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 LRRC75A-AS1Q8N1F1 130 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 RBPMSQ93062 196 aaKnown RBP17.17■□□□□ 0.34
CLN8-213ENST00000637156 PDCD10Q9BUL8 212 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 SLA2Q9H6Q3 261 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 SIRT7Q9NRC8 400 aa17.17■□□□□ 0.34
CLN8-213ENST00000637156 IGHV2-70DA0A0C4DH43 119 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 PRTN3P24158 256 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 CATR1Q13166 79 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 SPAG16Q8N0X2 631 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 TNFRSF14Q92956 283 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 ST6GALNAC6Q969X2 333 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 LPAR2Q9HBW0 351 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 DIAPH2-AS1Q14236 149 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 ZNF833PQ6ZTB9 187 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 OR11H4Q8NGC9 324 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 OR10X1Q8NGY0 326 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms