RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 HABP2Q14520 560 aaPredicted RBP5.45□□□□□ -1.54
UPF3B-205ENST00000636792 RBMS2Q15434 407 aaKnown RBP5.45□□□□□ -1.54
UPF3B-205ENST00000636792 FAM120AOSQ5T036 256 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 ZNF57Q68EA5 555 aaPredicted RBP5.45□□□□□ -1.54
UPF3B-205ENST00000636792 C11orf88Q6PI97 169 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 ZNF833PQ6ZTB9 187 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 LYSMD2Q8IV50 215 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 CMTM1Q8IZ96 169 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 SLC38A6Q8IZM9 456 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 PNKDQ8N490 385 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 TMEM86BQ8N661 226 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 ZDHHC22Q8N966 263 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 DTX3Q8N9I9 347 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 OR10V1Q8NGI7 309 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 OR4C16Q8NGL9 310 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 TERB2Q8NHR7 220 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 LHX4Q969G2 390 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 TOMM40LQ969M1 308 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 ST6GALNAC6Q969X2 333 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 RPEQ96AT9 228 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 C20orf173Q96LM9 149 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 HSD17B10Q99714 261 aaKnown RBP5.45□□□□□ -1.54
UPF3B-205ENST00000636792 SUCNR1Q9BXA5 334 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 MS4A7Q9GZW8 240 aaPredicted RBP5.45□□□□□ -1.54
UPF3B-205ENST00000636792 MEGF9Q9H1U4 602 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 IFI27L2Q9H2X8 130 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 OR1A1Q9P1Q5 309 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 ZNRD1Q9P1U0 126 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 PITPNC1Q9UKF7 332 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 RBM7Q9Y580 266 aaKnown RBP5.45□□□□□ -1.54
UPF3B-205ENST00000636792 POMT1Q9Y6A1 747 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 F8P00451 2351 aa5.45□□□□□ -1.54
UPF3B-205ENST00000636792 IGKV1D-8A0A087WSZ0 117 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 SAA2-SAA4A0A096LPE2 208 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 TRAV39A0A0B4J263 110 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 FAM172BPA6NC97 362 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 LY6LH3BQJ8 138 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 HSD17B6O14756 317 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 RBFOX2O43251 390 aaKnown RBP eCLIP5.44□□□□□ -1.54
UPF3B-205ENST00000636792 LYRM1O43325 122 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 GAPDHP04406 335 aaKnown RBP5.44□□□□□ -1.54
UPF3B-205ENST00000636792 AMY2AP04746 511 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 FGF2P09038 288 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 FAM157CP0CG43 387 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 SAA2P0DJI9 122 aaPredicted RBP5.44□□□□□ -1.54
UPF3B-205ENST00000636792 RRASP10301 218 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 SRD5A1P18405 259 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 COX7A1P24310 79 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 FCGR2CP31995 323 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 BRS3P32247 399 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 MC5RP33032 325 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 SRP14P37108 136 aaKnown RBP5.44□□□□□ -1.54
UPF3B-205ENST00000636792 GPR12P47775 334 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 THBS3P49746 956 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 CBX3Q13185 183 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 GNMTQ14749 295 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 BAK1Q16611 211 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 CT45A1Q5HYN5 189 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 KLF17Q5JT82 389 aaPredicted RBP5.44□□□□□ -1.54
UPF3B-205ENST00000636792 TPTE2P1Q5T6R2 138 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 DHRS7BQ6IAN0 325 aaPredicted RBP5.44□□□□□ -1.54
UPF3B-205ENST00000636792 MZT2BQ6NZ67 158 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 CSPG4Q6UVK1 2322 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 ZNF66Q6ZN08 573 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 C16orf82Q7Z2V1 217 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 THNSL2Q86YJ6 484 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 TGIF2LXQ8IUE1 241 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 CCDC71LQ8N9Z2 235 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 BVESQ8NE79 360 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 OR8H1Q8NGG4 311 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 OR52L2PQ8NGH6 319 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 OR5R1Q8NH85 324 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 CT45A3Q8NHU0 189 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 CD300LFQ8TDQ1 290 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 RTN4IP1Q8WWV3 396 aaPredicted RBP5.44□□□□□ -1.54
UPF3B-205ENST00000636792 MAFIPQ8WZ33 124 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 JMJD8Q96S16 334 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 RNF5Q99942 180 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 AIFM2Q9BRQ8 373 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 ZNF2Q9BSG1 426 aaPredicted RBP5.44□□□□□ -1.54
UPF3B-205ENST00000636792 BEX2Q9BXY8 128 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 C11orf54Q9H0W9 315 aaPredicted RBP5.44□□□□□ -1.54
UPF3B-205ENST00000636792 OR2D2Q9H210 308 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 HRASLSQ9HDD0 168 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 C19orf73Q9NVV2 129 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 PRELID3BQ9Y3B1 194 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 FAM96BQ9Y3D0 163 aa5.44□□□□□ -1.54
UPF3B-205ENST00000636792 ZNF469Q96JG9 3925 aaPredicted RBP5.43□□□□□ -1.54
UPF3B-205ENST00000636792 IGHV3-43A0A0B4J1X8 118 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 BTBD17A6NE02 478 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 CYSRT1A8MQ03 144 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 CLDN34H7C241 214 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 GPR31O00270 319 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 PTTG1O95997 202 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 APOA2P02652 100 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 PMP2P02689 132 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 CTSDP07339 412 aaPredicted RBP5.43□□□□□ -1.54
UPF3B-205ENST00000636792 OR8U9P0C7N5 309 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 ZNF735P0CB33 412 aa5.43□□□□□ -1.54
UPF3B-205ENST00000636792 IGHV3-43DP0DP04 118 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms