RNA–Protein interactions for RNA: ENST00000634338.1

SMARCA2-220, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-220ENST00000634338 SHCBP1LQ9BZQ2 653 aa4.39□□□□□ -1.71
SMARCA2-220ENST00000634338 TRIM4Q9C037 500 aa4.39□□□□□ -1.71
SMARCA2-220ENST00000634338 TPK1Q9H3S4 243 aa4.39□□□□□ -1.71
SMARCA2-220ENST00000634338 C12orf10Q9HB07 376 aa4.39□□□□□ -1.71
SMARCA2-220ENST00000634338 C12orf4Q9NQ89 552 aa4.39□□□□□ -1.71
SMARCA2-220ENST00000634338 EXPH5Q8NEV8 1989 aa4.39□□□□□ -1.71
SMARCA2-220ENST00000634338 DIDO1Q9BTC0 2240 aaKnown RBP4.39□□□□□ -1.71
SMARCA2-220ENST00000634338 NUP214P35658 2090 aaPredicted RBP4.39□□□□□ -1.71
SMARCA2-220ENST00000634338 SPTBN1Q01082 2364 aaKnown RBP4.39□□□□□ -1.71
SMARCA2-220ENST00000634338 DNAJC13O75165 2243 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 PCNX1Q96RV3 2341 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 PINLYPA6NC86 204 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 PSMD12O00232 456 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 UBFD1O14562 309 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 COPEO14579 308 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 SPAG7O75391 227 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 PDYNP01213 254 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 SERPINA7P05543 415 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 FREM3P0C091 2139 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 OCMP0CE72 109 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 ZNF3P17036 446 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 TAC1P20366 129 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 HIST1H1TP22492 207 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 CD40LGP29965 261 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 SERPINB1P30740 379 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 SSR2P43308 183 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 PSMB2P49721 201 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 FOXA1P55317 472 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 OR4D2P58180 307 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 DNAJB13P59910 316 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 ESRRGP62508 458 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 CD164Q04900 197 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 PRKCDQ05655 676 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 CCDC153Q494R4 210 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 TNFAIP8L3Q5GJ75 292 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 NIPAL1Q6NVV3 410 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 IGFL2Q6UWQ7 119 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 IGFL3Q6UXB1 125 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 Q6ZS92 163 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 C10orf107Q8IVU9 208 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 WDFY1Q8IWB7 410 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 BOD1L2Q8IYS8 172 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 ZCCHC24Q8N2G6 241 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 DRAM1Q8N682 238 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 NECAP1Q8NC96 275 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 OR4K17Q8NGC6 315 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 PHF10Q8WUB8 498 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 GHSRQ92847 366 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 RILPQ96NA2 401 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 ZIM3Q96PE6 472 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 GGTLC1Q9BX51 225 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 ZNF331Q9NQX6 463 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 PRTFDC1Q9NRG1 225 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 ZNF223Q9UK11 482 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 MMACHCQ9Y4U1 282 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 ASB4Q9Y574 426 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 TIMM22Q9Y584 194 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 COL12A1Q99715 3063 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 ZNF407Q9C0G0 2248 aa4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 FLNBO75369 2602 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-220ENST00000634338 NINQ8N4C6 2090 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 USP9YO00507 2555 aaPredicted RBP4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 KIR2DS1A0A191URI9 304 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 ISPDA4D126 451 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 FABP12A6NFH5 140 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 NDUFS5O43920 106 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 MT-ND4P03905 459 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 RD3LP0DJH9 198 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 MNAT1P51948 309 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 RAP1GDS1P52306 607 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 AQP5P55064 265 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 SMUG1Q53HV7 270 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 SCIMPQ6UWF3 145 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 DGAT2L6Q6ZPD8 337 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 PLEKHG7Q6ZR37 379 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 SLC16A13Q7RTY0 426 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 COMMD6Q7Z4G1 85 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 CCNYL1Q8N7R7 359 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 APCDD1LQ8NCL9 501 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 OR5W2Q8NH69 310 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 OR2AE1Q8NHA4 323 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 SFXN5Q8TD22 340 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 RNF138Q8WVD3 245 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 TNFRSF14Q92956 283 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 FLYWCH2Q96CP2 140 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 SERPINI1Q99574 410 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 NXF2Q9GZY0 626 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 ABCB9Q9NP78 766 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 C1orf109Q9NX04 203 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 DNAJC27Q9NZQ0 273 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 HECTD1Q9ULT8 2610 aa4.37□□□□□ -1.71
SMARCA2-220ENST00000634338 UTP20O75691 2785 aaKnown RBP4.36□□□□□ -1.71
SMARCA2-220ENST00000634338 NCKAP5O14513 1909 aa4.36□□□□□ -1.71
SMARCA2-220ENST00000634338 MYO7BQ6PIF6 2116 aa4.36□□□□□ -1.71
SMARCA2-220ENST00000634338 SETXQ7Z333 2677 aaKnown RBP4.36□□□□□ -1.71
SMARCA2-220ENST00000634338 ICE1Q9Y2F5 2266 aa4.36□□□□□ -1.71
SMARCA2-220ENST00000634338 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.36□□□□□ -1.71
SMARCA2-220ENST00000634338 A0A096LNJ9 63 aa4.36□□□□□ -1.71
SMARCA2-220ENST00000634338 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
SMARCA2-220ENST00000634338 J3QKU1 62 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms