RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 C1orf87Q8N0U7 546 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 SPAG16Q8N0X2 631 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 TPRX1Q8N7U7 411 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 RNASE11Q8TAA1 199 aaKnown RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 GNPNAT1Q96EK6 184 aaPredicted RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 LRRC46Q96FV0 321 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 LINC00052Q96N35 136 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 SMIM3Q9BZL3 60 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 OR2D2Q9H210 308 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 HIPK2Q9H2X6 1198 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 PRORYQ9H606 182 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 GFOD1Q9NXC2 390 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 CALYQ9NYX4 217 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 CLN8Q9UBY8 286 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 HSPB7Q9UBY9 170 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 CACNG5Q9UF02 275 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 CACFD1Q9UGQ2 172 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 SH3BGRL2Q9UJC5 107 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 PSG11Q9UQ72 335 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 STRAPQ9Y3F4 350 aaKnown RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 HCFC1P51610 2035 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 ARFGEF3Q5TH69 2177 aa4.61□□□□□ -1.67
NEK3-211ENST00000629912 DIDO1Q9BTC0 2240 aaKnown RBP4.61□□□□□ -1.67
NEK3-211ENST00000629912 RAI1Q7Z5J4 1906 aaPredicted RBP4.6□□□□□ -1.67
NEK3-211ENST00000629912 PPIAL4EA0A075B759 164 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 IGHV3-43A0A0B4J1X8 118 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 A0A1B0GW64 132 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 hADV38S2A0JD32 116 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 NKX6-3A6NJ46 265 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 LINC00473A8K010 186 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 DEFB108AA8MXU0 73 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 PPIAL4DF5H284 164 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 CCL21O00585 134 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 ST8SIA5O15466 376 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 NDUFA2O43678 99 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 RAMP3O60896 148 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 FBXO24O75426 580 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 CRYZL1O95825 349 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 HPRT1P00492 218 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 GYPAP02724 150 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 CD5P06127 495 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 PPIAL4FP0DN26 164 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 IGHV3-43DP0DP04 118 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 EPHA1P21709 976 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 OMGP23515 440 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 GPR12P47775 334 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 CAV2P51636 162 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 DYNLT3P51808 116 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 ZNF134P52741 427 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 AKR1C2P52895 323 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 F2RL1P55085 397 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 EDDM3BP56851 147 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 UBE2KP61086 200 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 CCL8P80075 99 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 TLE1Q04724 770 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 ATP6V1FQ16864 119 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 Q3ZCU0 254 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 CT45A1Q5HYN5 189 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 FAM201AQ5SY85 155 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 PXDC1Q5TGL8 231 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 NCR3LG1Q68D85 454 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 SP5Q6BEB4 398 aaPredicted RBP4.6□□□□□ -1.67
NEK3-211ENST00000629912 STX12Q86Y82 276 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 ZNF295-AS1Q8N0V1 137 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 ZNF808Q8N4W9 903 aaPredicted RBP4.6□□□□□ -1.67
NEK3-211ENST00000629912 ZNF439Q8NDP4 499 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 DEFB108BQ8NET1 73 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 BPIFCQ8NFQ6 507 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 OR5C1Q8NGR4 320 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 OR52E5Q8NH55 327 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 CT45A3Q8NHU0 189 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 TCTEX1D2Q8WW35 142 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 DDB2Q92466 427 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 PLPPR2Q96GM1 343 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 ADTRPQ96IZ2 230 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 CCL13Q99616 98 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 TMEM204Q9BSN7 226 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 PARD6GQ9BYG4 376 aaPredicted RBP4.6□□□□□ -1.67
NEK3-211ENST00000629912 IDI2-AS1Q9NZ38 188 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 PSENENQ9NZ42 101 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 COQ3Q9NZJ6 369 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 GNG12Q9UBI6 72 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 KAAG1Q9UBP8 84 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 PPIAL4AQ9Y536 164 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 LINC00312Q9Y6C7 94 aa4.6□□□□□ -1.67
NEK3-211ENST00000629912 TLN1Q9Y490 2541 aaKnown RBP4.6□□□□□ -1.67
NEK3-211ENST00000629912 CEP295Q9C0D2 2601 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 BOD1L1Q8NFC6 3051 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 LAMA5O15230 3695 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 RNASEK-C17orf49H0YIS7 233 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 ATXN7O15265 892 aaPredicted RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 ZG16O60844 167 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 CST7O76096 145 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 SCAF4O95104 1147 aaKnown RBP4.59□□□□□ -1.67
NEK3-211ENST00000629912 S1PR2O95136 353 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 KRASP01116 189 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 IFNA5P01569 189 aa4.59□□□□□ -1.67
NEK3-211ENST00000629912 ATP6V0CP27449 155 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms