RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 LIPT2A6NK58 231 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 C16orf97H3BN30 126 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 PNLIPP16233 465 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 NPBWR2P48146 333 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 KLF9Q13886 244 aaPredicted RBP11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 C2orf83Q53S99 150 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 MEIG1Q5JSS6 88 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 FAM109BQ6ICB4 259 aaPredicted RBP11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 CT55Q8WUE5 264 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 ZDHHC8Q9ULC8 765 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 GUCA2BQ16661 112 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 PRICKLE4Q2TBC4 344 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 TCF23Q7RTU1 214 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 ABHD3Q8WU67 409 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 OR5AC2Q9NZP5 309 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 NTMQ9P121 344 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 TRAV30A0A087WSZ9 112 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 PRDX2P32119 198 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 IGSF11Q5DX21 431 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 GUSBP11Q6P575 273 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 SLC25A34Q6PIV7 304 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 A0A1W2PQD3 144 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 C19orf24Q9BVV8 132 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 SF3B6Q9Y3B4 125 aaKnown RBP11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 TMEM250H0YL14 139 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 NAAAQ02083 359 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 TMEM177Q53S58 311 aa11.52□□□□□ -0.57
SYNGAP1-208ENST00000629380 EML2O95834 649 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 STARD6P59095 220 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 SUMO2P61956 95 aaKnown RBP11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 DMRTC1Q5HYR2 192 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 H3BMH7 237 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 PTPMT1Q8WUK0 201 aaPredicted RBP11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 NRIP2Q9BQI9 281 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 NPFFO15130 113 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 COX6B1P14854 86 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 MC5RP33032 325 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 ANKRD34AQ69YU3 496 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 TMEM30BQ3MIR4 351 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 GPR82Q96P67 336 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 SMIM13P0DJ93 91 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 CUL9Q8IWT3 2517 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 HMX2A2RU54 273 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 SHISA8B8ZZ34 492 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 HLA-DRB1P01911 266 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 SLC25A20O43772 301 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 NAT1P18440 290 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 ANOS1P23352 680 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 RPL8P62917 257 aaKnown RBP11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 IBA57Q5T440 356 aaKnown RBP11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 SPINK14Q6IE38 97 aa11.51□□□□□ -0.57
SYNGAP1-208ENST00000629380 IGKV3-7A0A075B6H7 116 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 GCSAMLQ5JQS6 135 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 PLA2G2FQ9BZM2 168 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 MED19A0JLT2 244 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 IGHV3-13P01766 116 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 IGHV3-7P01780 117 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 TRAF4Q9BUZ4 470 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 IGHV1OR21-1A0A087WYE8 117 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 PAGE4O60829 102 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 APELAP0DMC3 54 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 CCL2P13500 99 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 CTGFP29279 349 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 ZNF56Q15929 161 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 GAB4Q2WGN9 574 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 FAM169BQ8N8A8 192 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 WNT5BQ9H1J7 359 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 ZNF430Q9H8G1 570 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 NKX2-6A6NCS4 301 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 GAPDHP04406 335 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 GCSAMQ8N6F7 178 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 OR1K1Q8NGR3 316 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 LEUTXA8MZ59 168 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 CYB5R3P00387 301 aaPredicted RBP11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 CISD3P0C7P0 127 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 SEC11BP0C7V7 166 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 ZNF645Q8N7E2 425 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 PLXNA3P51805 1871 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 ASB1Q9Y576 335 aa11.5□□□□□ -0.57
SYNGAP1-208ENST00000629380 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 CEP192Q8TEP8 1941 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 SLC16A13Q7RTY0 426 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 LHX9Q9NQ69 397 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 TMEFF2Q9UIK5 374 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 NLRC5Q86WI3 1866 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 P2RY6Q15077 328 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 SEZ6L2Q6UXD5 910 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 ORAI1Q96D31 301 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 IGLV3-16A0A075B6K0 115 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 CXorf66Q5JRM2 361 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 PQLC2Q6ZP29 291 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 ATP5G2Q06055 141 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 ALG14Q96F25 216 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 NCOA6Q14686 2063 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 TMSB15BA0A087X1C1 80 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 RHBDD2Q6NTF9 364 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 WFDC3Q8IUB2 231 aa11.49□□□□□ -0.57
SYNGAP1-208ENST00000629380 OR8G5Q8NG78 346 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms