RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 PEX14O75381 377 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 CTXN2P0C2S0 81 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 MECP2P51608 486 aaKnown RBP10.22□□□□□ -0.77
PNKP-217ENST00000625216 PROK1P58294 105 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 FXYD4P59646 89 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 C17orf58Q2M2W7 97 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 LRRC75BQ2VPJ9 315 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 DHRS11Q6UWP2 260 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 TREML4Q6UXN2 200 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 LIAT1Q6ZQX7 453 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 ZNF554Q86TJ5 538 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 OR11H6Q8NGC7 330 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 OR6F1Q8NGZ6 308 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 RFESDQ8TAC1 157 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 GIMAP1Q8WWP7 306 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 IL1F10Q8WWZ1 152 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 ARL11Q969Q4 196 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 MOB3AQ96BX8 217 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 MALSU1Q96EH3 234 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 ZNF714Q96N38 554 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 PARP12Q9H0J9 701 aaKnown RBP10.22□□□□□ -0.77
PNKP-217ENST00000625216 SLC23A1Q9UHI7 598 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 ZNF221Q9UK13 617 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 ALG5Q9Y673 324 aa10.22□□□□□ -0.77
PNKP-217ENST00000625216 TRGV10A0A0A0MS01 117 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 IGHV3-43A0A0B4J1X8 118 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 IGKV1D-13A0A0B4J2D9 117 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 C7orf66A4D0T2 115 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 DIRAS3O95661 229 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 PPYP01298 95 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 RLN1P04808 185 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 IGHV1-8P0DP01 117 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 IGHV3-43DP0DP04 118 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 IGKV1-13P0DP09 117 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 COX7A1P24310 79 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 ZNF626Q68DY1 528 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 C11orf88Q6PI97 169 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 TMED4Q7Z7H5 227 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 CADM3Q8N126 398 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 OR52L2PQ8NGH6 319 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 C17orf50Q8WW18 174 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 CAPSLQ8WWF8 208 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 CORO2AQ92828 525 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 TOMM40LQ969M1 308 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 TMEM230Q96A57 120 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 SEC22CQ9BRL7 303 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 C5orf66Q9H5L9 145 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 GPR132Q9UNW8 380 aa10.21□□□□□ -0.77
PNKP-217ENST00000625216 UBE2J1Q9Y385 318 aaPredicted RBP10.21□□□□□ -0.77
PNKP-217ENST00000625216 PKD1L1Q8TDX9 2849 aa10.21□□□□□ -0.78
PNKP-217ENST00000625216 ZNF729A6NN14 1252 aaPredicted RBP10.2□□□□□ -0.78
PNKP-217ENST00000625216 ODF3BA8MYP8 253 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 M0QZ24 198 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 F2RL2O00254 374 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 SPINT2O43291 252 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 DHFRP00374 187 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 PGAM2P15259 253 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 PI3P19957 117 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 BCAP31P51572 246 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 HERV-K104P61576 105 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 SURF2Q15527 256 aaPredicted RBP10.2□□□□□ -0.78
PNKP-217ENST00000625216 LTC4SQ16873 150 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 ADAD2Q8NCV1 583 aaKnown RBP10.2□□□□□ -0.78
PNKP-217ENST00000625216 OR10J5Q8NHC4 309 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 GALMQ96C23 342 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 TOLLIPQ9H0E2 274 aa10.2□□□□□ -0.78
PNKP-217ENST00000625216 RANBP3Q9H6Z4 567 aaPredicted RBP10.2□□□□□ -0.78
PNKP-217ENST00000625216 KBTBD11-OT1A0A1B0GTJ5 212 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 FAM172BPA6NC97 362 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 HSPA12AO43301 675 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 PRAF2O60831 178 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 MMP23AO75900 390 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 ARG1P05089 322 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 IL5P05113 134 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 CTSDP07339 412 aaPredicted RBP10.19□□□□□ -0.78
PNKP-217ENST00000625216 GZMHP20718 246 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 PPP1CCP36873 323 aaKnown RBP10.19□□□□□ -0.78
PNKP-217ENST00000625216 ECI1P42126 302 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 UCP3P55916 312 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 LOXL3P58215 753 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 HTD2P86397 168 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 SRSF4Q08170 494 aaKnown RBP10.19□□□□□ -0.78
PNKP-217ENST00000625216 UTF1Q5T230 341 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 MINOS1Q5TGZ0 78 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 PRAMEF5Q5TYX0 476 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 GLDNQ6ZMI3 551 aaPredicted RBP10.19□□□□□ -0.78
PNKP-217ENST00000625216 SLC25A42Q86VD7 318 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 OR10V1Q8NGI7 309 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 OR52B4Q8NGK2 314 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 PIFOQ8TCI5 191 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 RTBDNQ9BSG5 229 aaPredicted RBP10.19□□□□□ -0.78
PNKP-217ENST00000625216 GHITMQ9H3K2 345 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 GAL3ST2Q9H3Q3 398 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 LINC00574Q9H8X3 128 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 RDH8Q9NYR8 311 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 TAS2R3Q9NYW6 316 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 JPT1Q9UK76 154 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 PITPNC1Q9UKF7 332 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 OR2W1Q9Y3N9 320 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 SESN1Q9Y6P5 492 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms