RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 CD300LFQ8TDQ1 290 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 C1orf159Q96HA4 380 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 TP53RKQ96S44 253 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 ZNF251Q9BRH9 671 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 ABHD14AQ9BUJ0 271 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 NMES1Q9C002 83 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 BPESC1Q9GZL8 116 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 RANBP3Q9H6Z4 567 aaPredicted RBP9.64□□□□□ -0.87
LINC00963-220ENST00000625171 RANGRFQ9HD47 186 aaPredicted RBP9.64□□□□□ -0.87
LINC00963-220ENST00000625171 LIN7CQ9NUP9 197 aaKnown RBP9.64□□□□□ -0.87
LINC00963-220ENST00000625171 SDHAF2Q9NX18 166 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 PSG11Q9UQ72 335 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 HSD17B6O14756 317 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 FOXH1O75593 365 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 SLC25A16P16260 332 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 CCL3L1P16619 93 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 VDAC1P21796 283 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 OMGP23515 440 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 ARHGDIBP52566 201 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 CATR1Q13166 79 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 C2orf68Q2NKX9 166 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 ODF3L1Q8IXM7 274 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 BEND2Q8NDZ0 799 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 CLDND2Q8NHS1 167 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 CASTOR1Q8WTX7 329 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 TMEM186Q96B77 213 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 ADTRPQ96IZ2 230 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 FYTTD1Q96QD9 318 aaKnown RBP9.63□□□□□ -0.87
LINC00963-220ENST00000625171 OR2D2Q9H210 308 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 TMEM133Q9H2Q1 129 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 KPTNQ9Y664 436 aa9.63□□□□□ -0.87
LINC00963-220ENST00000625171 DOCK11Q5JSL3 2073 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 IGHV3-43A0A0B4J1X8 118 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 C22orf46C9J442 243 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 J3QR06 171 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 PHF1O43189 567 aaPredicted RBP9.62□□□□□ -0.87
LINC00963-220ENST00000625171 ENSAO43768 121 aaKnown RBP9.62□□□□□ -0.87
LINC00963-220ENST00000625171 IFNA21P01568 189 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 IGLV1-47P01700 117 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 HNRNPCP07910 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC00963-220ENST00000625171 IGHV3-43DP0DP04 118 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 PRTN3P24158 256 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 DUTP33316 252 aaKnown RBP9.62□□□□□ -0.87
LINC00963-220ENST00000625171 KIR2DS2P43631 304 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 GPR12P47775 334 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 GZMKP49863 264 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 ERVFRD-1P60508 538 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 CD83Q01151 205 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 FGL1Q08830 312 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 SLC9A3R2Q15599 337 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 ZNF585BQ52M93 769 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 PRAMEF5Q5TYX0 476 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 RBPMSQ93062 196 aaKnown RBP9.62□□□□□ -0.87
LINC00963-220ENST00000625171 LSM10Q969L4 123 aaKnown RBP9.62□□□□□ -0.87
LINC00963-220ENST00000625171 ST6GALNAC6Q969X2 333 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 C2orf50Q96LR7 162 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 HYLS1Q96M11 299 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 S1PR3Q99500 378 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 FOXC2Q99958 501 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 METTL8Q9H825 291 aaKnown RBP9.62□□□□□ -0.87
LINC00963-220ENST00000625171 MAP1AP78559 2803 aaPredicted RBP9.62□□□□□ -0.87
LINC00963-220ENST00000625171 ACANP16112 2415 aa9.62□□□□□ -0.87
LINC00963-220ENST00000625171 ST8SIA5O15466 376 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 ATG12O94817 140 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 PRRX1P54821 245 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 BRWD1-AS2P59051 145 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 CD300CQ08708 224 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 DEFB113Q30KQ7 82 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 FAM53AQ6NSI3 398 aaPredicted RBP9.61□□□□□ -0.87
LINC00963-220ENST00000625171 GSG1LQ6UXU4 331 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 ZNF833PQ6ZTB9 187 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 FAM219AQ8IW50 185 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 SELENOHQ8IZQ5 122 aaKnown RBP9.61□□□□□ -0.87
LINC00963-220ENST00000625171 ABHD12Q8N2K0 398 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 Q8N7P7 452 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 OR11H6Q8NGC7 330 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 DDB2Q92466 427 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 C5orf30Q96GV9 206 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 ABHD14BQ96IU4 210 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 HEXA-AS1Q9H8Q6 139 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 ZFP57Q9NU63 452 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 RNF150Q9ULK6 438 aa9.61□□□□□ -0.87
LINC00963-220ENST00000625171 AKAP6Q13023 2319 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 IGHV2-70DA0A0C4DH43 119 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 HMSDA8MTL9 139 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 G3V3Q6 166 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 GOSR2O14653 212 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 SLC31A2O15432 143 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 SERPINE2P07093 398 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 DNASE1P24855 282 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 NFYBP25208 207 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 ZFP36P26651 326 aaKnown RBP9.6□□□□□ -0.87
LINC00963-220ENST00000625171 THBS3P49746 956 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 RPL30P62888 115 aaKnown RBP9.6□□□□□ -0.87
LINC00963-220ENST00000625171 SP6Q3SY56 376 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 ZFP69Q49AA0 526 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 NMSQ5H8A3 153 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 DCAF12L2Q5VW00 463 aa9.6□□□□□ -0.87
LINC00963-220ENST00000625171 GGNBP1Q5YKI7 109 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms