RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 HIST1H1EP10412 219 aaKnown RBP4.86□□□□□ -1.63
ERCC6-213ENST00000624341 AGAP20933 346 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 FGF12P61328 243 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 SLC25A47Q6Q0C1 308 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 SELENOHQ8IZQ5 122 aaKnown RBP4.86□□□□□ -1.63
ERCC6-213ENST00000624341 VSTM2AQ8TAG5 236 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 CT55Q8WUE5 264 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 ADIPOR1Q96A54 375 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 HARBI1Q96MB7 349 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 NPVFQ9HCQ7 196 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 IL36RNQ9UBH0 155 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 WNT16Q9UBV4 365 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 CARHSP1Q9Y2V2 147 aaKnown RBP4.86□□□□□ -1.63
ERCC6-213ENST00000624341 NEUROG3Q9Y4Z2 214 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 ZNF638Q14966 1978 aaKnown RBP4.86□□□□□ -1.63
ERCC6-213ENST00000624341 RNF224P0DH78 156 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 SMIM10L1P0DMW3 83 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 PRF1P14222 555 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 GLIPR1P48060 266 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 REG1BP48304 166 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 SOX8P57073 446 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 EFNB1P98172 346 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 TEX30Q5JUR7 227 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 MIC13Q5XKP0 118 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 FDX2Q6P4F2 183 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 TGIF2LYQ8IUE0 185 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 SLC22A18ASQ8N1D0 253 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 SMIM10Q96HG1 83 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 TP53RKQ96S44 253 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 ZDBF2Q9HCK1 2354 aa4.86□□□□□ -1.63
ERCC6-213ENST00000624341 A0A087WV48 116 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 TRAV14DV4A0A0A6YYC5 116 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 K7ERU9 68 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 ZNF207O43670 478 aaKnown RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 ORM1P02763 201 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 HIST1H1BP16401 226 aaKnown RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 OTX1P32242 354 aaPredicted RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 RIGQ13278 110 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 TMEM187Q14656 261 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 OR4A47Q6IF82 309 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 C1QL2Q7Z5L3 287 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 MDP1Q86V88 176 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 APOBEC4Q8WW27 367 aaKnown RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 OR2V2Q96R30 315 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 TMEM74BQ9NUR3 256 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 PRNDQ9UKY0 176 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 TDRD6O60522 2096 aaKnown RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 IGHV5-10-1A0A0J9YXX1 117 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 PLAUP00749 431 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 CEACAM21Q3KPI0 293 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 SCGB1D4Q6XE38 83 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 REC114Q7Z4M0 266 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 ZNF501Q96CX3 271 aaPredicted RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 MRPL18Q9H0U6 180 aaKnown RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 PARLQ9H300 379 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 RPRMQ9NS64 109 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 SIP14410 1827 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 LOC389332A0A1B0GUA5 103 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 HBZP02008 142 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 NPBWR2P48146 333 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 PCP4P48539 62 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 COMPP49747 757 aaPredicted RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 FXYD3Q14802 87 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 ATOH7Q8N100 152 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 FAM222BQ8WU58 562 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 Q96M66 194 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 SPTBN1Q01082 2364 aaKnown RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 A6NDN8 102 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 J3KRW8 73 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 CLDN14O95500 239 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 SRSF3P84103 164 aaKnown RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 GFRALQ6UXV0 394 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 ZNF826PQ6ZT77 177 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 SLC25A28Q96A46 364 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 P2RX4Q99571 388 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 ATG101Q9BSB4 218 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 RHBDL1O75783 438 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 GOSR1O95249 250 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 NMUP48645 174 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 IBA57Q5T440 356 aaKnown RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 PQLC2Q6ZP29 291 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 ZNF818PQ6ZRF7 136 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 TEX29Q8N6K0 151 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 PAXXQ9BUH6 204 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 CISD1Q9NZ45 108 aaKnown RBP4.85□□□□□ -1.63
ERCC6-213ENST00000624341 HSPB8Q9UJY1 196 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 NPTNQ9Y639 398 aa4.85□□□□□ -1.63
ERCC6-213ENST00000624341 GNG7O60262 68 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 ZG16O60844 167 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 OR2H2O95918 312 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 ACP1P24666 158 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 CEBPDP49716 269 aaPredicted RBP4.84□□□□□ -1.63
ERCC6-213ENST00000624341 RELBQ01201 579 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 COL10A1Q03692 680 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 FBXW9Q5XUX1 488 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 TMEM108Q6UXF1 575 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 OR4B1Q8NGF8 309 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 OR1L1Q8NH94 360 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 ASCL3Q9NQ33 180 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 CLEC1BQ9P126 229 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms