RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 HIF1ANQ9NWT6 349 aa14.54□□□□□ -0.08
PTCHD3-202ENST00000622555 PIPOXQ9P0Z9 390 aa14.54□□□□□ -0.08
PTCHD3-202ENST00000622555 G3V3Q6 166 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 SLC22A5O76082 557 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 OR2A4O95047 310 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 IGLV2-14P01704 120 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 MMP9P14780 707 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 KLRD1Q13241 179 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 DRAM1Q8N682 238 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 OR10X1Q8NGY0 326 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 AKR1E2Q96JD6 320 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 OR2A7Q96R45 310 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 MYO9AB2RTY4 2548 aa14.53□□□□□ -0.08
PTCHD3-202ENST00000622555 TNFSF12O43508 249 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 S100GP29377 79 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 PRRX1P54821 245 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 C4orf46Q504U0 113 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 LINC00311Q8N616 119 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 CCDC71LQ8N9Z2 235 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 BVESQ8NE79 360 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 OR11H4Q8NGC9 324 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 TNFRSF14Q92956 283 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 TMEM230Q96A57 120 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 TBX15Q96SF7 602 aa14.52□□□□□ -0.08
PTCHD3-202ENST00000622555 TEX13DA0A0J9YY54 714 aaPredicted RBP14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 RAB29O14966 203 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 SMAD7O15105 426 aaKnown RBP14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 TGFAP01135 160 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 OR4E1P0C645 316 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 HOXB4P17483 251 aaPredicted RBP14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 TMEM128Q5BJH2 165 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 NCR3LG1Q68D85 454 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 PDZD9Q8IXQ8 264 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 CIARTQ8N365 385 aaPredicted RBP14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 ZNF596Q8TC21 504 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 RTN4IP1Q8WWV3 396 aaPredicted RBP14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 C5orf30Q96GV9 206 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 GPHA2Q96T91 129 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 SDHAF2Q9NX18 166 aa14.52□□□□□ -0.09
PTCHD3-202ENST00000622555 SAA2-SAA4A0A096LPE2 208 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 GIPP09681 153 aaPredicted RBP14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 SAA2P0DJI9 122 aaPredicted RBP14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 VAMP1P23763 118 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 GATA3P23771 443 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 RND3P61587 244 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 PPP1R1AQ13522 171 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 MSMO1Q15800 293 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 NDUFA5Q16718 116 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 RPL39P5Q59GN2 51 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 HCP5Q6MZN7 132 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 FAHD2BQ6P2I3 314 aaPredicted RBP14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 ODF3L1Q8IXM7 274 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 ZBTB34Q8NCN2 500 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 OR52B4Q8NGK2 314 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 FAHD2AQ96GK7 314 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 MGAT4CQ9UBM8 478 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 AUP1Q9Y679 476 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 ABCA1O95477 2261 aa14.51□□□□□ -0.09
PTCHD3-202ENST00000622555 CRYM-AS1A6NIL9 109 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 RNASEK-C17orf49H0YIS7 233 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 PGLYRP1O75594 196 aaPredicted RBP14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 ARG1P05089 322 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 UBE2MP61081 183 aaKnown RBP14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 HLA-DRB5Q30154 266 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 TBC1D26Q86UD7 250 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 SGPP2Q8IWX5 399 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 BEND2Q8NDZ0 799 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 OR11H6Q8NGC7 330 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 ZNF431Q8TF32 576 aaPredicted RBP14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 LHX4Q969G2 390 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 C7orf69Q9H7B7 122 aa14.5□□□□□ -0.09
PTCHD3-202ENST00000622555 M0R1X1 148 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 MPPED1O15442 326 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 IGLV1-47P01700 117 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 HLA-AP01891 365 aaKnown RBP14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 IL3RAP26951 378 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 CYB5R2Q6BCY4 276 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 FAM210AQ96ND0 272 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 S1PR3Q99500 378 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 NAA60Q9H7X0 242 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 GAB2Q9UQC2 676 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 FLNAP21333 2647 aaKnown RBP14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 A0A1W2PRD5 423 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 A0A1W2PRF3 423 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 A0A1W2PRM7 423 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 ZNF16P17020 682 aaPredicted RBP14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 RAP2BP61225 183 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 DHODHQ02127 395 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 DHRS2Q13268 280 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 C11orf88Q6PI97 169 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 C1orf229Q6ZS94 237 aaPredicted RBP14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 LYG2Q86SG7 212 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 OR51H1Q8NH63 302 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 AMMECR1Q9Y4X0 333 aaPredicted RBP14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 HSPB11Q9Y547 144 aa14.49□□□□□ -0.09
PTCHD3-202ENST00000622555 C9orf170A2RU37 121 aa14.48□□□□□ -0.09
PTCHD3-202ENST00000622555 PROP1O75360 226 aa14.48□□□□□ -0.09
PTCHD3-202ENST00000622555 SUPT4H1P63272 117 aaKnown RBP14.48□□□□□ -0.09
PTCHD3-202ENST00000622555 SLC9A3R2Q15599 337 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms