RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TRAV25A0A0B4J276 109 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
VPS11-209ENST00000622309 SNURFLB1AK76 121 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 CD5LO43866 347 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 PF4P02776 101 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 ASAH2BP0C7U1 165 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 IER3P46695 156 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 FASLGP48023 281 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 ZNF83P51522 516 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 HERV-K104P61576 105 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 OXLD1Q5BKU9 147 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 BVES-AS1Q5T3Y7 98 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 LCN12Q6JVE5 192 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 OR2A1Q8NGT9 310 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 ABHD14BQ96IU4 210 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 SRSF8Q9BRL6 282 aaKnown RBP6.77□□□□□ -1.33
VPS11-209ENST00000622309 DERL1Q9BUN8 251 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 MCTS1Q9ULC4 181 aaKnown RBP6.77□□□□□ -1.33
VPS11-209ENST00000622309 CACNA1IQ9P0X4 2223 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 ZNF324O75467 553 aaPredicted RBP6.77□□□□□ -1.33
VPS11-209ENST00000622309 IGLL1P15814 213 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 CTLA4P16410 223 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 FBLP22087 321 aaKnown RBP6.77□□□□□ -1.33
VPS11-209ENST00000622309 CLDN17P56750 224 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 ZP4Q12836 540 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 ACKR1Q16570 336 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 ACSF3Q4G176 576 aaPredicted RBP6.77□□□□□ -1.33
VPS11-209ENST00000622309 Q56UQ5 140 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 FHL5Q5TD97 284 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 OR4P4Q8NGL7 312 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 NUS1Q96E22 293 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 KLHDC7BQ96G42 594 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 PSMG3Q9BT73 122 aaPredicted RBP6.77□□□□□ -1.33
VPS11-209ENST00000622309 GPR27Q9NS67 375 aa6.77□□□□□ -1.33
VPS11-209ENST00000622309 COA3Q9Y2R0 106 aaPredicted RBP6.77□□□□□ -1.33
VPS11-209ENST00000622309 C3orf85A0A1B0GTC6 90 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 A0A1W2PRX2 142 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 LRP5LA4QPB2 252 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 EPOPA6NHQ4 379 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 SRSF10O75494 262 aaKnown RBP6.76□□□□□ -1.33
VPS11-209ENST00000622309 TMEM50AO95807 157 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 CA2P00918 260 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 FUT6P51993 359 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 POU3F1Q03052 451 aaPredicted RBP6.76□□□□□ -1.33
VPS11-209ENST00000622309 ZNF77Q15935 545 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.76□□□□□ -1.33
VPS11-209ENST00000622309 DEFB134Q4QY38 66 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 WDR82Q6UXN9 313 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 C6orf201Q7Z4U5 140 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 GATSQ8NAP1 163 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 OR4N2Q8NGD1 307 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 OR10V1Q8NGI7 309 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 ST6GALNAC6Q969X2 333 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 HDHD3Q9BSH5 251 aaPredicted RBP6.76□□□□□ -1.33
VPS11-209ENST00000622309 FAM60AQ9NP50 221 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 KIAA2026Q5HYC2 2103 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 PPIAL4EA0A075B759 164 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 PPIAL4CA0A0B4J2A2 164 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 A0A1W2PS18 150 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 C1QTNF9BB2RNN3 333 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 PPIAL4DF5H284 164 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 PAGE4O60829 102 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 NKX2-2O95096 273 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 C1QTNF9P0C862 333 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 PPIAL4FP0DN26 164 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 PLCXD3Q63HM9 321 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 SPSB1Q96BD6 273 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 C1orf147Q96MC9 270 aaPredicted RBP6.76□□□□□ -1.33
VPS11-209ENST00000622309 LRRC61Q9BV99 259 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 PHF7Q9BWX1 381 aaPredicted RBP6.76□□□□□ -1.33
VPS11-209ENST00000622309 PBOV1Q9GZY1 135 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 S1PR5Q9H228 398 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 TAAR3PQ9P1P4 343 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 CD207Q9UJ71 328 aa6.76□□□□□ -1.33
VPS11-209ENST00000622309 ADH5P11766 374 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
VPS11-209ENST00000622309 C5orf64Q2M2E5 130 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 PRTGQ2VWP7 1150 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 HLA-BQ31612 363 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 HAPLN4Q86UW8 402 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 FAM19A2Q8N3H0 131 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 OR51E1Q8TCB6 317 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 STRADBQ9C0K7 418 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 LIME1Q9H400 295 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 FNDC4Q9H6D8 234 aaPredicted RBP6.75□□□□□ -1.33
VPS11-209ENST00000622309 SLC25A22Q9H936 323 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 ERRFI1Q9UJM3 462 aaPredicted RBP6.75□□□□□ -1.33
VPS11-209ENST00000622309 IGLV1-36A0A0B4J1U3 117 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 MLNRO43193 412 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 RRADP55042 308 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 RPL27P61353 136 aaKnown RBP6.75□□□□□ -1.33
VPS11-209ENST00000622309 ZNF776Q68DI1 518 aaPredicted RBP6.75□□□□□ -1.33
VPS11-209ENST00000622309 ODF3L1Q8IXM7 274 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 OR10G8Q8NGN5 311 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 ZC2HC1AQ96GY0 325 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 GMPPAQ96IJ6 420 aaPredicted RBP6.75□□□□□ -1.33
VPS11-209ENST00000622309 NAA38Q9BRA0 125 aaKnown RBP6.75□□□□□ -1.33
VPS11-209ENST00000622309 CLEC7AQ9BXN2 247 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 THYN1Q9P016 225 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 NAT8BQ9UHF3 227 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms