RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 DCTN5Q9BTE1 182 aa11.26□□□□□ -0.61
SIRPA-204ENST00000622179 GYPAP02724 150 aa11.26□□□□□ -0.61
SIRPA-204ENST00000622179 WNT5AP41221 380 aa11.26□□□□□ -0.61
SIRPA-204ENST00000622179 OR10D4PQ8NGN7 298 aa11.26□□□□□ -0.61
SIRPA-204ENST00000622179 IGKV3D-15A0A087WSY6 115 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 ODAMA1E959 279 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 C16orf97H3BN30 126 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 MMP9P14780 707 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 NTF4P34130 210 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 ZNF880Q6PDB4 577 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 MRGPRGQ86SM5 289 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 VKORC1L1Q8N0U8 176 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 PLPPR1Q8TBJ4 325 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 ZNF355PQ9NSJ1 428 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 C11orf94C9JXX5 98 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 ZG16O60844 167 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 LILRA1O75019 489 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 FABP4P15090 132 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 MDKP21741 143 aaPredicted RBP11.25□□□□□ -0.61
SIRPA-204ENST00000622179 NEIL1Q96FI4 390 aaPredicted RBP11.25□□□□□ -0.61
SIRPA-204ENST00000622179 REG4Q9BYZ8 158 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 DOK5Q9P104 306 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 TRAV24A0A0B4J272 114 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 WIPF3A6NGB9 483 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 G3V3Q6 166 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 GALR1P47211 349 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 HIST1H3AP68431 136 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 CSRP2Q16527 193 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 RNF212Q495C1 297 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 TMEM204Q9BSN7 226 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 CHD7Q9P2D1 2997 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 SPINK4O60575 86 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 OPRK1P41145 380 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 BATFQ16520 125 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 KHDC3LQ587J8 217 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 FAM201AQ5SY85 155 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 H1FOOQ8IZA3 346 aaPredicted RBP11.25□□□□□ -0.61
SIRPA-204ENST00000622179 EIF4E3Q8N5X7 224 aaKnown RBP11.25□□□□□ -0.61
SIRPA-204ENST00000622179 GAL3ST2Q9H3Q3 398 aa11.25□□□□□ -0.61
SIRPA-204ENST00000622179 ABCA4P78363 2273 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 TRAV38-1A0A0B4J264 116 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 TNFRSF9Q07011 255 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 RSPO1Q2MKA7 263 aaPredicted RBP11.24□□□□□ -0.61
SIRPA-204ENST00000622179 C1orf185Q5T7R7 199 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 MYPOPQ86VE0 399 aaPredicted RBP11.24□□□□□ -0.61
SIRPA-204ENST00000622179 TAF15Q92804 592 aaKnown RBP eCLIP11.24□□□□□ -0.61
SIRPA-204ENST00000622179 SMIM8Q96KF7 97 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 RHOVQ96L33 236 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 ABHD14AQ9BUJ0 271 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 BCL2P10415 239 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 PRR27Q6MZM9 219 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 SLC35E3Q7Z769 313 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 TIMD4Q96H15 378 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 COX7A1P24310 79 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 MEOX2P50222 304 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 SERF2P84101 59 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 ARSJQ5FYB0 599 aaPredicted RBP11.24□□□□□ -0.61
SIRPA-204ENST00000622179 BTF3L4Q96K17 158 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 C18orf12Q96KH6 178 aa11.24□□□□□ -0.61
SIRPA-204ENST00000622179 NCOA6Q14686 2063 aaPredicted RBP11.24□□□□□ -0.61
SIRPA-204ENST00000622179 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
SIRPA-204ENST00000622179 AP4M1O00189 453 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 ERVFC1-1P60608 527 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 IL22RA2Q969J5 263 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 POM121Q96HA1 1249 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 GINS3Q9BRX5 216 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CYTL1Q9NRR1 136 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 RPRMQ9NS64 109 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 LOC105371267A0A1B0GV96 52 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 MARCH11A6NNE9 402 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 SCGB2A1O75556 95 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 HOXB1P14653 301 aaPredicted RBP11.23□□□□□ -0.61
SIRPA-204ENST00000622179 RPL31P62899 125 aaKnown RBP11.23□□□□□ -0.61
SIRPA-204ENST00000622179 SRSF6Q13247 344 aaKnown RBP11.23□□□□□ -0.61
SIRPA-204ENST00000622179 HFEQ30201 348 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 DBX1A6NMT0 343 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CYB5R3P00387 301 aaPredicted RBP11.23□□□□□ -0.61
SIRPA-204ENST00000622179 APELAP0DMC3 54 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CD1BP29016 333 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 THBS3P49746 956 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 PNRC1Q12796 327 aaPredicted RBP11.23□□□□□ -0.61
SIRPA-204ENST00000622179 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 DNM1P46Q6ZS02 220 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 HS3ST6Q96QI5 342 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 NAT8Q9UHE5 227 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 FREM1Q5H8C1 2179 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CTXND1A0A1B0GTU2 59 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CT45A6P0DMU7 189 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CT45A5P0DMU8 189 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CT45A7P0DMV0 189 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 UBE2G1P62253 170 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CT45A1Q5HYN5 189 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 ACSM6Q6P461 480 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CT45A3Q8NHU0 189 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CMTM2Q8TAZ6 248 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 CYYR1Q96J86 154 aa11.23□□□□□ -0.61
SIRPA-204ENST00000622179 TPPP3Q9BW30 176 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms