RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 UBE2L5PA0A1B0GUS4 154 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 FAM90A9PA6NNJ1 464 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 SEC14L6B5MCN3 397 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 TMEM250H0YL14 139 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 C15orf65H3BRN8 121 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 RAMP3O60896 148 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 ZNF737O75373 536 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 S1PR2O95136 353 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 IGKV1D-33P01593 117 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 IGKV1-33P01594 117 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 OPN1MWP04001 364 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 ADH4P08319 380 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 OPN1MW2P0DN77 364 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 OPN1MW3P0DN78 364 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 G6PCP35575 357 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 FGF8P55075 233 aaPredicted RBP8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 NDUFA6P56556 154 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 GNB2P62879 340 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 HTD2P86397 168 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 PMP22Q01453 160 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 AESQ08117 197 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 ZNF718Q3SXZ3 478 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 DNLZQ5SXM8 178 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 ACSM6Q6P461 480 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 Q6ZR03 302 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 CYP2G1PQ6ZSU1 146 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 ZNF826PQ6ZT77 177 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 TMPRSS7Q7RTY8 843 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 C1orf87Q8N0U7 546 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 RPP25LQ8N5L8 163 aaKnown RBP8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 FAM169BQ8N8A8 192 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 NINJ1Q92982 152 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 FAM210BQ96KR6 192 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 HSD17B10Q99714 261 aaKnown RBP8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 PYGO2Q9BRQ0 406 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 MANBALQ9NQG1 85 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 PLSCR4Q9NRQ2 329 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 NAT8Q9UHE5 227 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 WASF3Q9UPY6 502 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 PTPRBP23467 1997 aa8.04□□□□□ -1.12
IGHV3-54-201ENST00000622166 IFITM10A6NMD0 228 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 PRR33A8MZF0 331 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 LINC00587B1AMM8 73 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 PHOX2AO14813 284 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 SOX15O60248 233 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST1H2BKO60814 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 KBTBD11O94819 623 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 AGFG2O95081 481 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 PTBP3O95758 552 aaKnown RBP8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 KRASP01116 189 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST1H2BJP06899 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 FGF7P21781 194 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST1H2BOP23527 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HOXC12P31275 282 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST1H2BBP33778 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 ELLP55199 621 aaPredicted RBP8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST1H2BDP58876 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 CD81P60033 236 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST1H2BCP62807 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 COL10A1Q03692 680 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 ZNF816Q0VGE8 651 aaPredicted RBP8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST2H2BEQ16778 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 TMEM241Q24JQ0 296 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 CR1LQ2VPA4 569 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 TMEM249Q2WGJ8 235 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 SMIM21Q3B7S5 101 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 NCMAPQ5T1S8 102 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 PRAMEF6Q5VXH4 476 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 OR8G2PQ6IF36 304 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 H2BFWTQ7Z2G1 175 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 FAM90A1Q86YD7 464 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 GCNT2Q8N0V5 402 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 ZNF808Q8N4W9 903 aaPredicted RBP8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 C9orf106Q8NAJ2 232 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 OR10P1Q8NGE3 313 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 OR13A1Q8NGR1 328 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 MRGPRDQ8TDS7 321 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 DTD1Q8TEA8 209 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST1H2BHQ93079 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 SARAFQ96BY9 339 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 DIRC2Q96SL1 478 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST1H2BNQ99877 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 HIST1H2BMQ99879 126 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 ACTR3CQ9C0K3 210 aaPredicted RBP8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 CLN8Q9UBY8 286 aa8.03□□□□□ -1.12
IGHV3-54-201ENST00000622166 DOCK7Q96N67 2140 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 TRAV17A0A0B4J275 112 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 IGHV2OR16-5A0A0B4J2B6 119 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR5H1A6NKK0 313 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 CYB5BO43169 146 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 SPINT2O43291 252 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 TIMM8AO60220 97 aaPredicted RBP8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 ZG16O60844 167 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 YIF1AO95070 293 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 PFN1P07737 140 aaKnown RBP8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 CD55P08174 381 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 CECR9P0C854 216 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 GCH1P30793 250 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 CFHR2P36980 270 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms