RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 MRPL54Q6P161 138 aaKnown RBP6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 SHISA6Q6ZSJ9 500 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 MRPL21Q7Z2W9 205 aaKnown RBP6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 OR5D14Q8NGL3 314 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 SCGB1C1Q8TD33 95 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 FAM103A1Q9BTL3 118 aaKnown RBP6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 RBM24Q9BX46 236 aaKnown RBP6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 PECRQ9BY49 303 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 FAM206AQ9NX38 181 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 PILRBQ9UKJ0 227 aa6.4□□□□□ -1.39
TRIM49B-202ENST00000622138 MDFIC2A0A1B0GVS7 189 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 VSTM5A8MXK1 200 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 ZNF324O75467 553 aaPredicted RBP6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 HAND1O96004 215 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 HLA-DRB1P01911 266 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 TTRP02766 147 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 MT-ND6P03923 174 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 CFHR1Q03591 330 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 HLA-DRB5Q30154 266 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 HLA-BQ31612 363 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 SP6Q3SY56 376 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 COX19Q49B96 90 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 HLA-DQA1Q5Y7H0 255 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 TCF23Q7RTU1 214 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 SGMS2Q8NHU3 365 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 NINJ1Q92982 152 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 SIGLEC12Q96PQ1 595 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 SPACA5Q96QH8 159 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 CENPMQ9NSP4 180 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 EXPH5Q8NEV8 1989 aa6.39□□□□□ -1.39
TRIM49B-202ENST00000622138 GAGE10A6NGK3 116 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 H0YJW9 148 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 SLC33A1O00400 549 aaPredicted RBP6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 MPPED1O15442 326 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 CST7O76096 145 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 MYF5P13349 255 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 CTSSP25774 331 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 POU3F1Q03052 451 aaPredicted RBP6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 MPV17L2Q567V2 206 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 PHYHD1Q5SRE7 291 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 LHX4Q969G2 390 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 BORCS7Q96B45 105 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 LIN37Q96GY3 246 aaPredicted RBP6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 POM121L2Q96KW2 1035 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 KCNK17Q96T54 332 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 NUDT22Q9BRQ3 303 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 EMC6Q9BV81 110 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 TM2D1Q9BX74 207 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 BANF2Q9H503 90 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 UBE2ZQ9H832 354 aaPredicted RBP6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 ST20Q9HBF5 79 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 NECAP2Q9NVZ3 263 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 ANXA10Q9UJ72 324 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 MED12Q93074 2177 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 CFAP54Q96N23 3096 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 TRAV8-6A0A0B4J262 113 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 A0A1W2PR77 199 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 NPIPA5E9PKD4 350 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 PHF1O43189 567 aaPredicted RBP6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 ZNF205O95201 554 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 CA2P00918 260 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 LINC00869P0C866 280 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 ZNF823P16415 610 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 ZNF20P17024 532 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 FBLP22087 321 aaKnown RBP6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 SRD5A2P31213 254 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 LTBRP36941 435 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 ZNF133P52736 654 aaPredicted RBP6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 FBXW4P57775 412 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 OR1D5P58170 312 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 ERASQ7Z444 233 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 CPEB2Q7Z5Q1 589 aaKnown RBP6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 C17orf82Q86X59 251 aaPredicted RBP6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 FAM58AQ8N1B3 248 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 OR5A1Q8NGJ0 315 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 OR4F5Q8NH21 305 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 RNF133Q8WVZ7 376 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 SFRP2Q96HF1 295 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 FER1L6-AS2Q96M78 137 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 NPIPA1Q9UND3 350 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 WASHC3Q9Y3C0 194 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 TIMM9Q9Y5J7 89 aa6.38□□□□□ -1.39
TRIM49B-202ENST00000622138 SDK1Q7Z5N4 2213 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 TMEM265A0A087WTH1 108 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 A0A1W2PP11 408 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 C2CD4DB7Z1M9 353 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 J3KRW8 73 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 K7EP34 96 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 DEGS1O15121 323 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 EFNA2O43921 213 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 PMCHP20382 165 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 CBLN1P23435 193 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 CD1BP29016 333 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 OPRM1P35372 400 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 GFRA1P56159 465 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 ID3Q02535 119 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 DMRTC1Q5HYR2 192 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 FAM180AQ6UWF9 173 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 OR10V1Q8NGI7 309 aa6.37□□□□□ -1.39
TRIM49B-202ENST00000622138 OR51T1Q8NGJ9 327 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms